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1810009J06Rik
Gene Detail
Symbol

Name
ID
1810009J06Rik
RIKEN cDNA 1810009J06 gene
MGI:1920876
Feature Type
protein coding gene
Genetic Map
Chromosome 6
19.02 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:40964754-40968435 bp, + strand
From VEGA annotation of GRCm38

  3682 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:117995  Vertebrate Homology Class
2 mouse

Protein SuperFamily: trypsin
Gene Tree: 1810009J06Rik

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
Interactions
1810009J06Rik interacts with 30 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process proteolysis
Component extracellular space
Function serine-type endopeptidase activity
External Resources: FuncBase
Expression
cDNA source data(6)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000051311 (Evidence)
Ensembl Gene Model ENSMUSG00000094808 (Evidence)
Entrez Gene 73626 (Evidence)
UniGene 425319
DFCI TC1587659
DoTS DT.55190670
Consensus CDS Project CCDS20042.1
International Mouse Phenotyping Consortium Status 1810009J06Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000051311 VEGA Gene Model | MGI Sequence Detail 3682 C57BL/6J ±  kb
transcript OTTMUST00000129842 VEGA | MGI Sequence Detail 882 Not Applicable 
polypeptide OTTMUSP00000069682 VEGA | MGI Sequence Detail 247 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(3) UniProt(1)
Polymorphisms
SNPs within 2kb(9 from dbSNP Build 137)    SNPs within 2kb including multiple locations(23)
Protein-related
information
ResourceIDDescription
InterPro IPR001254 Peptidase S1
InterPro IPR001314 Peptidase S1A, chymotrypsin-type
InterPro IPR018114 Peptidase S1, trypsin family, active site
InterPro IPR009003 Trypsin-like cysteine/serine peptidase domain
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory