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Lrrc72 Gene Detail
Summary
  • Symbol
    Lrrc72
  • Name
    leucine rich repeat containing 72
  • Synonyms
    1700108M19Rik, 4933421E18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920830
    NCBI Gene: 71156
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:36208345-36253398 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 16.63 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920830
protein coding gene Chr12:36208343-36256396 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019691
protein coding gene Chr12:34437132-34485425 (-)
A/J MGP_AJ_G0019657
protein coding gene Chr12:33352360-33398911 (-)
AKR/J MGP_AKRJ_G0019628
protein coding gene Chr12:34392836-34438946 (-)
BALB/cJ MGP_BALBcJ_G0019635
protein coding gene Chr12:33548206-33593231 (-)
C3H/HeJ MGP_C3HHeJ_G0019439
protein coding gene Chr12:34314660-34363332 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020082
protein coding gene Chr12:35395619-35444316 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017706
protein coding gene Chr12:32467362-32515657 (-)
CAST/EiJ MGP_CASTEiJ_G0018992
protein coding gene Chr12:29386043-29434614 (-)
CBA/J MGP_CBAJ_G0019411
protein coding gene Chr12:36589129-36646248 (-)
DBA/2J MGP_DBA2J_G0019524
protein coding gene Chr12:33198263-33243317 (-)
FVB/NJ MGP_FVBNJ_G0019513
protein coding gene Chr12:32920136-32965861 (-)
LP/J MGP_LPJ_G0019594
protein coding gene Chr12:34517102-34564490 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019549
protein coding gene Chr12:36250159-36298869 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020122
protein coding gene Chr12:33915353-33960202 (-)
PWK/PhJ MGP_PWKPhJ_G0018759
protein coding gene Chr12:27892706-27938432 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018549
protein coding gene Chr12:28535669-28585918 (-)
WSB/EiJ MGP_WSBEiJ_G0019042
protein coding gene Chr12:34162895-34218040 (-)



Homology
more
  • Human Ortholog
    LRRC72, leucine rich repeat containing 72
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LRRC72, leucine rich repeat containing 72
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100506049
    neXtProt AC: NX_A6NJI9
    UniProt: A6NJI9

  • Chr Location
    chr7:16526827-16581554 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 90358
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LRRC72
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020545 Ensembl Gene Model | MGI Sequence Detail 45054 C57BL/6J ±  kb
transcript ENSMUST00000221155 Ensembl | MGI Sequence Detail 1141 Not Applicable  
polypeptide ENSMUSP00000152732 Ensembl | MGI Sequence Detail 288 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR001611 Leucine-rich repeat
    IPR032675 Leucine-rich repeat domain superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
Other
Accession IDs
less
MGI:1918406
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:236757 West DB, et al., Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. PLoS Genet. 2016 Feb;12(2):e1005691

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory