About   Help   FAQ
Lrrc72 Gene Detail
Summary
  • Symbol
    Lrrc72
  • Name
    leucine rich repeat containing 72
  • Synonyms
    1700108M19Rik, 4933421E18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920830
    NCBI Gene: 71156
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:36208345-36253398 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 16.63 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920830
protein coding gene Chr12:36208329-36256396 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019691
protein coding gene Chr12:34437132-34485425 (-)
A/J MGP_AJ_G0019657
protein coding gene Chr12:33352360-33398911 (-)
AKR/J MGP_AKRJ_G0019628
protein coding gene Chr12:34392836-34438946 (-)
BALB/cJ MGP_BALBcJ_G0019635
protein coding gene Chr12:33548206-33593231 (-)
C3H/HeJ MGP_C3HHeJ_G0019439
protein coding gene Chr12:34314660-34363332 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020082
protein coding gene Chr12:35395619-35444316 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017706
protein coding gene Chr12:32467362-32515657 (-)
CAST/EiJ MGP_CASTEiJ_G0018992
protein coding gene Chr12:29386043-29434614 (-)
CBA/J MGP_CBAJ_G0019411
protein coding gene Chr12:36589129-36646248 (-)
DBA/2J MGP_DBA2J_G0019524
protein coding gene Chr12:33198263-33243317 (-)
FVB/NJ MGP_FVBNJ_G0019513
protein coding gene Chr12:32920136-32965861 (-)
LP/J MGP_LPJ_G0019594
protein coding gene Chr12:34517102-34564490 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019549
protein coding gene Chr12:36250159-36298869 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020122
protein coding gene Chr12:33915353-33960202 (-)
PWK/PhJ MGP_PWKPhJ_G0018759
protein coding gene Chr12:27892706-27938432 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018549
protein coding gene Chr12:28535669-28585918 (-)
WSB/EiJ MGP_WSBEiJ_G0019042
protein coding gene Chr12:34162895-34218040 (-)



Homology
more
  • Human Ortholog
    LRRC72, leucine rich repeat containing 72
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LRRC72, leucine rich repeat containing 72
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CFAP279, FAP279
  • Links
    NCBI Gene ID: 100506049
    neXtProt AC: NX_A6NJI9
    UniProt: A6NJI9

  • Chr Location
    chr7:16526827-16581554 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 90358
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LRRC72
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020545 Ensembl Gene Model | MGI Sequence Detail 45054 C57BL/6J ±  kb
transcript ENSMUST00000221155 Ensembl | MGI Sequence Detail 1141 Not Applicable  
polypeptide ENSMUSP00000152732 Ensembl | MGI Sequence Detail 288 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001611 Leucine-rich repeat
    IPR042655 Leucine-rich repeat-containing protein 72
    IPR032675 Leucine-rich repeat domain superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
Other
Accession IDs
less
MGI:1918406
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:236757 West DB, et al., Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. PLoS Genet. 2016 Feb;12(2):e1005691

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/10/2020
MGI 6.16
The Jackson Laboratory