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1700080N15Rik Gene Detail
Summary
  • Symbol
    1700080N15Rik
  • Name
    RIKEN cDNA 1700080N15 gene
  • Synonyms
    4933408D14Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920739
    NCBI Gene: 73489
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:4132065-4141141 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 2.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920739
lncRNA gene Chr2:4132063-4141141 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003494
antisense lncRNA gene Chr2:1155301-1164515 (-)
A/J MGP_AJ_G0003474
antisense lncRNA gene Chr2:1106297-1115276 (-)
AKR/J MGP_AKRJ_G0003453
antisense lncRNA gene Chr2:1121848-1130776 (-)
BALB/cJ MGP_BALBcJ_G0003463
antisense lncRNA gene Chr2:1078711-1088028 (-)
C3H/HeJ MGP_C3HHeJ_G0003411
antisense lncRNA gene Chr2:1117764-1126714 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003601
antisense lncRNA gene Chr2:1152088-1162204 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003111
antisense lncRNA gene Chr2:978555-989592 (-)
CAST/EiJ MGP_CASTEiJ_G0003374
antisense lncRNA gene Chr2:1111555-1122112 (-)
CBA/J MGP_CBAJ_G0003408
antisense lncRNA gene Chr2:1212478-1222215 (-)
DBA/2J MGP_DBA2J_G0003416
antisense lncRNA gene Chr2:1074630-1083626 (-)
FVB/NJ MGP_FVBNJ_G0003435
antisense lncRNA gene Chr2:1077834-1087108 (-)
LP/J MGP_LPJ_G0003489
antisense lncRNA gene Chr2:1143178-1157121 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003423
antisense lncRNA gene Chr2:1155311-1164388 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003604
antisense lncRNA gene Chr2:1116449-1125379 (-)
PWK/PhJ MGP_PWKPhJ_G0003330
antisense lncRNA gene Chr2:1049096-1060868 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003275
antisense lncRNA gene Chr2:1115482-1124444 (-)
WSB/EiJ MGP_WSBEiJ_G0003409
antisense lncRNA gene Chr2:1126205-1136958 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73489 NCBI Gene Model | MGI Sequence Detail 9077 C57BL/6J ±  kb
transcript NR_040500 RefSeq | MGI Sequence Detail 434 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
Other
Accession IDs
less
MGI:1918318
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory