About   Help   FAQ
1700080G11Rik Gene Detail
Summary
  • Symbol
    1700080G11Rik
  • Name
    RIKEN cDNA 1700080G11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920738
    NCBI Gene: 73488
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:127531622-127532885 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 61.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920738
lncRNA gene Chr4:127474841-127532885 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006509
lincRNA gene Chr4:129296174-129297437 (+)
A/J MGP_AJ_G0006501
lincRNA gene Chr4:124192104-124193367 (+)
AKR/J MGP_AKRJ_G0006475
lincRNA gene Chr4:127618732-127619995 (+)
BALB/cJ MGP_BALBcJ_G0006475
lincRNA gene Chr4:124760689-124761952 (+)
C3H/HeJ MGP_C3HHeJ_G0006425
lincRNA gene Chr4:127678666-127679929 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006641
lincRNA gene Chr4:134216888-134218151 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005920
lincRNA gene Chr4:117309621-117310881 (+)
CAST/EiJ MGP_CASTEiJ_G0006357
lincRNA gene Chr4:125810258-125811517 (+)
CBA/J MGP_CBAJ_G0006408
lincRNA gene Chr4:137487957-137489218 (+)
DBA/2J MGP_DBA2J_G0006430
lincRNA gene Chr4:124631588-124632851 (+)
FVB/NJ MGP_FVBNJ_G0006452
lincRNA gene Chr4:123303061-123304323 (+)
LP/J MGP_LPJ_G0006510
lincRNA gene Chr4:129586994-129588257 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006439
lincRNA gene Chr4:142458106-142459369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006645
lincRNA gene Chr4:127984602-127985865 (+)
PWK/PhJ MGP_PWKPhJ_G0006294
lincRNA gene Chr4:121150432-121151695 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006203
lincRNA gene Chr4:123808978-123810223 (+)
WSB/EiJ MGP_WSBEiJ_G0006403
lincRNA gene Chr4:128084710-128085970 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 1700080G11Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086771 Ensembl Gene Model | MGI Sequence Detail 1264 C57BL/6J ±  kb
transcript ENSMUST00000156401 Ensembl | MGI Sequence Detail 436 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/10/2019
MGI 6.14
The Jackson Laboratory