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Snhg9 Gene Detail
Summary
  • Symbol
    Snhg9
  • Name
    small nucleolar RNA host gene 9
  • Synonyms
    1700072N11Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1920724
    NCBI Gene: 73474
Location & Maps
more
  • Sequence Map
    Chr17:24719531-24719965 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      435 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 12.51 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SNHG9, small nucleolar RNA host gene 9
  • Human Ortholog
    SNHG9, small nucleolar RNA host gene 9
    Orthology source: HGNC
  • Synonyms
    NCRNA00062
  • Links
    NCBI Gene ID: 735301

  • Chr Location
    16p13.3; chr16:1964996-1965504 (+)  GRCh38.p2

  • HCOP
    human homology predictions: SNHG9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    12
  • Gene trapped
    12
Expression
less
  • cDNA Data
  • Other Mouse Links
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029229 VEGA Gene Model | MGI Sequence Detail 435 C57BL/6J ±  kb
transcript OTTMUST00000072458 VEGA | MGI Sequence Detail 183 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    52 from dbSNP Build 142
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory