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C2cd6 Gene Detail
Summary
  • Symbol
    C2cd6
  • Name
    C2 calcium dependent domain containing 6
  • Synonyms
    1700052H20Rik, 4930408G06Rik, Als2cr11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920713
    NCBI Gene: 73463
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:59050506-59094900 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 29.20 cM, cytoband C2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    184 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920713
protein coding gene Chr1:59050506-59095025 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016061
protein coding gene Chr1:58996563-59044742 (-)
A/J MGP_AJ_G0016044
protein coding gene Chr1:56945901-56989603 (-)
AKR/J MGP_AKRJ_G0016000
protein coding gene Chr1:58538426-58584400 (-)
BALB/cJ MGP_BALBcJ_G0015999
protein coding gene Chr1:56983938-57031962 (-)
C3H/HeJ MGP_C3HHeJ_G0015831
protein coding gene Chr1:58787430-58833712 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016452
protein coding gene Chr1:61321479-61368187 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014173
protein coding gene Chr1:52770822-52815690 (-)
CAST/EiJ MGP_CASTEiJ_G0015413
protein coding gene Chr1:57922857-57972329 (-)
CBA/J MGP_CBAJ_G0015803
protein coding gene Chr1:63241432-63290251 (-)
DBA/2J MGP_DBA2J_G0015904
protein coding gene Chr1:56368678-56414937 (-)
FVB/NJ MGP_FVBNJ_G0015906
protein coding gene Chr1:55673295-55718049 (-)
LP/J MGP_LPJ_G0015976
protein coding gene Chr1:59881685-59925953 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015926
protein coding gene Chr1:66178882-66229091 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016499
protein coding gene Chr1:58448460-58494289 (-)
PWK/PhJ MGP_PWKPhJ_G0015200
protein coding gene Chr1:55708758-55754027 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014980
protein coding gene Chr1:57972481-58021659 (-)
WSB/EiJ MGP_WSBEiJ_G0015476
protein coding gene Chr1:58151479-58198441 (-)



Homology
more
  • Human Ortholog
    C2CD6, C2 calcium dependent domain containing 6
  • Vertebrate Orthologs
    2
  • Human Ortholog
    C2CD6, C2 calcium dependent domain containing 6
    Orthology source: HGNC
  • Synonyms
    ALS2CR11
  • Links
    NCBI Gene ID: 151254
    neXtProt AC: NX_Q53TS8
    UniProt: Q53TS8

  • Chr Location
    2q33.1; chr2:201487421-201619182 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072295 Ensembl Gene Model | MGI Sequence Detail 44395 C57BL/6J ±  kb
transcript ENSMUST00000097080 Ensembl | MGI Sequence Detail 2131 Not Applicable  
polypeptide ENSMUSP00000094845 Ensembl | MGI Sequence Detail 557 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR031462 C2 calcium-dependent domain-containing protein 6
Molecular
Reagents
less
  • All nucleic 8
    Genomic 3
    cDNA 5

    Microarray probesets 5
Other
Accession IDs
less
MGI:1915429
References
more
  • Summaries
    All 25
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory