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1700061F12Rik Gene Detail
Summary
  • Symbol
    1700061F12Rik
  • Name
    RIKEN cDNA 1700061F12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920688
    NCBI Gene: 73438
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:9189515-9197477 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 6.11 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920688
lncRNA gene Chr2:9189515-9197484 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005862
lincRNA gene Chr2:6478952-6487787 (+)
A/J MGP_AJ_G0005854
lincRNA gene Chr2:6184210-6191958 (+)
AKR/J MGP_AKRJ_G0005829
lincRNA gene Chr2:6361275-6369046 (+)
BALB/cJ MGP_BALBcJ_G0005833
lincRNA gene Chr2:6186789-6194613 (+)
C3H/HeJ MGP_C3HHeJ_G0005780
lincRNA gene Chr2:6333439-6342497 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005993
lincRNA gene Chr2:6666539-6674245 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005330
lincRNA gene Chr2:5736223-5744667 (+)
CAST/EiJ MGP_CASTEiJ_G0005717
lincRNA gene Chr2:6376248-6384075 (+)
CBA/J MGP_CBAJ_G0005765
lincRNA gene Chr2:6901979-6912319 (+)
DBA/2J MGP_DBA2J_G0005786
lincRNA gene Chr2:6128624-6136538 (+)
FVB/NJ MGP_FVBNJ_G0005812
lincRNA gene Chr2:6086426-6095680 (+)
LP/J MGP_LPJ_G0005866
lincRNA gene Chr2:6358819-6366545 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005799
lincRNA gene Chr2:6921402-6934211 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005990
lincRNA gene Chr2:6325692-6334240 (+)
PWK/PhJ MGP_PWKPhJ_G0005666
lincRNA gene Chr2:6100928-6108667 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005579
lincRNA gene Chr2:6301429-6309163 (+)
WSB/EiJ MGP_WSBEiJ_G0005770
lincRNA gene Chr2:6422391-6434601 (+)



Homology
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Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085580 Ensembl Gene Model | MGI Sequence Detail 7963 C57BL/6J ±  kb
transcript ENSMUST00000132414 Ensembl | MGI Sequence Detail 876 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory