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1700065J11Rik Gene Detail
Summary
  • Symbol
    1700065J11Rik
  • Name
    RIKEN cDNA 1700065J11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920659
    NCBI Gene: 73409
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:35330846-35336825 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920659
lncRNA gene Chr6:35330846-35336831 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006939
lincRNA gene Chr6:33481470-33487443 (+)
A/J MGP_AJ_G0006933
lincRNA gene Chr6:32025311-32031274 (+)
AKR/J MGP_AKRJ_G0006903
lincRNA gene Chr6:33102391-33108356 (+)
BALB/cJ MGP_BALBcJ_G0006909
lincRNA gene Chr6:32215781-32221749 (+)
C3H/HeJ MGP_C3HHeJ_G0006854
lincRNA gene Chr6:33072161-33078137 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007074
lincRNA gene Chr6:34301492-34307464 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006320
lincRNA gene Chr6:30109596-30115554 (+)
CAST/EiJ MGP_CASTEiJ_G0006771
lincRNA gene Chr6:32914610-32920631 (+)
CBA/J MGP_CBAJ_G0006836
lincRNA gene Chr6:35655450-35661426 (+)
DBA/2J MGP_DBA2J_G0006856
lincRNA gene Chr6:31901276-31907254 (+)
FVB/NJ MGP_FVBNJ_G0006879
lincRNA gene Chr6:31701885-31707863 (+)
LP/J MGP_LPJ_G0006939
lincRNA gene Chr6:33580368-33586358 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006860
lincRNA gene Chr6:37938327-37944302 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007076
lincRNA gene Chr6:32982716-32988695 (+)
PWK/PhJ MGP_PWKPhJ_G0006713
lincRNA gene Chr6:31540329-31546395 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006621
lincRNA gene Chr6:32681530-32687398 (+)
WSB/EiJ MGP_WSBEiJ_G0006826
lincRNA gene Chr6:32933860-32939827 (+)



Homology
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Expression
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  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107341 Ensembl Gene Model | MGI Sequence Detail 5980 C57BL/6J ±  kb
transcript ENSMUST00000201560 Ensembl | MGI Sequence Detail 424 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory