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1700048F04Rik Gene Detail
Summary
  • Symbol
    1700048F04Rik
  • Name
    RIKEN cDNA 1700048F04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920646
    NCBI Gene: 73396
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:125928770-125952630 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 64.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920646
lncRNA gene Chr5:125928762-125952633 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006808
lincRNA gene Chr5:129806068-129834278 (+)
A/J MGP_AJ_G0006802
lincRNA gene Chr5:124366271-124391202 (+)
AKR/J MGP_AKRJ_G0006772
lincRNA gene Chr5:128400415-128426716 (+)
BALB/cJ MGP_BALBcJ_G0006778
lincRNA gene Chr5:125702276-125726074 (+)
C3H/HeJ MGP_C3HHeJ_G0006723
lincRNA gene Chr5:128998665-129023933 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006942
lincRNA gene Chr5:134813338-134841464 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006198
lincRNA gene Chr5:118890709-118913975 (+)
CAST/EiJ MGP_CASTEiJ_G0006646
lincRNA gene Chr5:128157129-128184993 (+)
CBA/J MGP_CBAJ_G0006705
lincRNA gene Chr5:140102120-140129259 (+)
DBA/2J MGP_DBA2J_G0006725
lincRNA gene Chr5:124375938-124401053 (+)
FVB/NJ MGP_FVBNJ_G0006749
lincRNA gene Chr5:123460668-123485362 (+)
LP/J MGP_LPJ_G0006809
lincRNA gene Chr5:130331387-130360200 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006732
lincRNA gene Chr5:143579372-143604146 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006945
lincRNA gene Chr5:128015443-128042531 (+)
PWK/PhJ MGP_PWKPhJ_G0006585
lincRNA gene Chr5:123228766-123254942 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006491
lincRNA gene Chr5:125656778-125681629 (+)
WSB/EiJ MGP_WSBEiJ_G0006696
lincRNA gene Chr5:128714338-128739832 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700048F04Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105274 Ensembl Gene Model | MGI Sequence Detail 23861 C57BL/6J ±  kb
transcript ENSMUST00000199057 Ensembl | MGI Sequence Detail 1064 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory