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1700049E22Rik Gene Detail
Summary
  • Symbol
    1700049E22Rik
  • Name
    RIKEN cDNA 1700049E22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920645
    NCBI Gene: 73395
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:100527400-100533426 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920645
lncRNA gene Chr6:100527400-100533426 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007032
lincRNA gene Chr6:102569904-102575831 (+)
A/J MGP_AJ_G0007028
lincRNA gene Chr6:98636180-98642253 (+)
AKR/J MGP_AKRJ_G0006997
lincRNA gene Chr6:101345865-101351836 (+)
BALB/cJ MGP_BALBcJ_G0007003
lincRNA gene Chr6:98607830-98614147 (+)
C3H/HeJ MGP_C3HHeJ_G0006920
lincRNA gene Chr6:83070756-83077653 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007169
lincRNA gene Chr6:105148389-105156225 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006400
lincRNA gene Chr6:96457563-96463488 (+)
CAST/EiJ MGP_CASTEiJ_G0006859
lincRNA gene Chr6:101581415-101588984 (+)
CBA/J MGP_CBAJ_G0006928
lincRNA gene Chr6:109174032-109183312 (+)
DBA/2J MGP_DBA2J_G0006950
lincRNA gene Chr6:97762338-97768300 (+)
FVB/NJ MGP_FVBNJ_G0006974
lincRNA gene Chr6:96942301-96948244 (+)
LP/J MGP_LPJ_G0007035
lincRNA gene Chr6:102614483-102620406 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006954
lincRNA gene Chr6:112942457-112948375 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007174
lincRNA gene Chr6:101258032-101265426 (+)
PWK/PhJ MGP_PWKPhJ_G0006799
lincRNA gene Chr6:96793857-96800263 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006709
lincRNA gene Chr6:100146711-100153577 (+)
WSB/EiJ MGP_WSBEiJ_G0006917
lincRNA gene Chr6:101772815-101780324 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 73395 NCBI Gene Model | MGI Sequence Detail 6027 C57BL/6J ±  kb
transcript NR_040525 RefSeq | MGI Sequence Detail 507 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:105810 Akeson EC, et al., Chromosomal inversion discovered in C3H/HeJ mice. Genomics. 2006 Feb;87(2):311-3

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory