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1700060J05Rik Gene Detail
Summary
  • Symbol
    1700060J05Rik
  • Name
    RIKEN cDNA 1700060J05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920641
    NCBI Gene: 73391
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:53562983-53564697 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 28.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920641
lncRNA gene Chr4:53562983-53564697 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003902
antisense lncRNA gene Chr4:52208560-52210274 (-)
A/J MGP_AJ_G0003882
antisense lncRNA gene Chr4:50204833-50206547 (-)
AKR/J MGP_AKRJ_G0003859
antisense lncRNA gene Chr4:51576532-51578246 (-)
BALB/cJ MGP_BALBcJ_G0003869
antisense lncRNA gene Chr4:50391134-50392848 (-)
C3H/HeJ MGP_C3HHeJ_G0003815
antisense lncRNA gene Chr4:52126508-52128222 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004016
antisense lncRNA gene Chr4:54123967-54125681 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003508
antisense lncRNA gene Chr4:47160046-47161773 (-)
CAST/EiJ MGP_CASTEiJ_G0003780
antisense lncRNA gene Chr4:51773351-51775061 (-)
CBA/J MGP_CBAJ_G0003808
antisense lncRNA gene Chr4:55979083-55980797 (-)
DBA/2J MGP_DBA2J_G0003825
antisense lncRNA gene Chr4:50174418-50176132 (-)
FVB/NJ MGP_FVBNJ_G0003843
antisense lncRNA gene Chr4:49399669-49401383 (-)
LP/J MGP_LPJ_G0003904
antisense lncRNA gene Chr4:52312763-52314477 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003831
antisense lncRNA gene Chr4:59181589-59183303 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004012
antisense lncRNA gene Chr4:51809739-51811453 (-)
PWK/PhJ MGP_PWKPhJ_G0003735
antisense lncRNA gene Chr4:50125411-50127121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003681
antisense lncRNA gene Chr4:51097350-51099059 (-)
WSB/EiJ MGP_WSBEiJ_G0003815
antisense lncRNA gene Chr4:51714096-51715806 (-)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084970 Ensembl Gene Model | MGI Sequence Detail 1715 C57BL/6J ±  kb
transcript ENSMUST00000138377 Ensembl | MGI Sequence Detail 1060 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory