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1700049L16Rik Pseudogene Detail
Summary
  • Symbol
    1700049L16Rik
  • Name
    RIKEN cDNA 1700049L16 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:1920633
    NCBI Gene: 108950
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:71980092-71980634 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 37.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920633
pseudogene Chr10:71979885-71980690 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010528
pseudogene Chr10:71999941-72000745 (-)
A/J MGP_AJ_G0010521
pseudogene Chr10:69531137-69531941 (-)
AKR/J MGP_AKRJ_G0010481
pseudogene Chr10:71439424-71440228 (-)
BALB/cJ MGP_BALBcJ_G0010495
pseudogene Chr10:69719914-69720718 (-)
C3H/HeJ MGP_C3HHeJ_G0010419
pseudogene Chr10:71418841-71419645 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010763
pseudogene Chr10:74493004-74493808 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009432
pseudogene Chr10:65995737-65996543 (-)
CAST/EiJ MGP_CASTEiJ_G0010244
pseudogene Chr10:71567604-71568408 (-)
CBA/J MGP_CBAJ_G0010388
pseudogene Chr10:77432792-77433596 (-)
DBA/2J MGP_DBA2J_G0010421
pseudogene Chr10:68876024-68876828 (-)
FVB/NJ MGP_FVBNJ_G0010437
pseudogene Chr10:68031030-68031834 (-)
LP/J MGP_LPJ_G0010510
pseudogene Chr10:72425324-72426128 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010408
pseudogene Chr10:79469884-79470688 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010736
pseudogene Chr10:71381554-71382358 (-)
PWK/PhJ MGP_PWKPhJ_G0010143
pseudogene Chr10:68685458-68686261 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009956
pseudogene Chr10:70716094-70716896 (-)
WSB/EiJ MGP_WSBEiJ_G0010307
pseudogene Chr10:71369842-71370646 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700049L16Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043859 Ensembl Gene Model | MGI Sequence Detail 543 C57BL/6J ±  kb
transcript ENSMUST00000049520 Ensembl | MGI Sequence Detail 543 Not Applicable  
polypeptide Q8BW07 UniProt | EBI | MGI Sequence Detail 180 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR033335 Microtubule-associated protein Jupiter
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory