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Actrt1 Gene Detail
Summary
  • Symbol
    Actrt1
  • Name
    actin-related protein T1
  • Synonyms
    1700061J02Rik, Arp-T1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920610
    NCBI Gene: 73360
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:46329007-46330345 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 24.54 cM, cytoband A3.1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920610
protein coding gene ChrX:46329007-46330345 (.)
129S1/SvImJ MGP_129S1SvImJ_G0035683
protein coding gene ChrX:41447143-41448481 (+)
A/J MGP_AJ_G0035666
protein coding gene ChrX:41312103-41313441 (+)
AKR/J MGP_AKRJ_G0035586
protein coding gene ChrX:42412087-42413425 (+)
BALB/cJ MGP_BALBcJ_G0035652
protein coding gene ChrX:41049775-41051113 (+)
C3H/HeJ MGP_C3HHeJ_G0035356
protein coding gene ChrX:41750804-41752142 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036181
protein coding gene ChrX:42426106-42427444 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033033
protein coding gene ChrX:39136722-39138060 (+)
CAST/EiJ MGP_CASTEiJ_G0034647
protein coding gene ChrX:29384491-29385829 (+)
CBA/J MGP_CBAJ_G0035330
protein coding gene ChrX:43596267-43597605 (+)
DBA/2J MGP_DBA2J_G0035484
protein coding gene ChrX:41159674-41161012 (+)
FVB/NJ MGP_FVBNJ_G0035433
protein coding gene ChrX:40924099-40925437 (+)
LP/J MGP_LPJ_G0035572
protein coding gene ChrX:41748327-41749665 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035471
protein coding gene ChrX:44912890-44914228 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036199
protein coding gene ChrX:41385643-41386981 (+)
PWK/PhJ MGP_PWKPhJ_G0034346
protein coding gene ChrX:28917288-28918626 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034191
protein coding gene ChrX:30108516-30109854 (+)
WSB/EiJ MGP_WSBEiJ_G0034791
protein coding gene ChrX:41002968-41004306 (+)



Homology
more
  • Human Ortholog
    ACTRT1, actin related protein T1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ACTRT1, actin related protein T1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    AIP1, ARIP1, ARPT1, HSD27
  • Links
    NCBI Gene ID: 139741
    neXtProt AC: NX_Q8TDG2
    UniProt: Q8TDG2

  • Chr Location
    Xq25; chrX:128050962-128052403 (-)  GRCh38.p7

Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73360 NCBI Gene Model | MGI Sequence Detail 1339 C57BL/6J ±  kb
transcript NM_028514 RefSeq | MGI Sequence Detail 1339 C57BL/6  
polypeptide Q9D9J3 UniProt | EBI | MGI Sequence Detail 376 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:82103 Goodson HV, et al., Molecular evolution of the actin family. J Cell Sci. 2002 Jul 1;115(Pt 13):2619-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory