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Ttc29 Gene Detail
Summary
  • Symbol
    Ttc29
  • Name
    tetratricopeptide repeat domain 29
  • Synonyms
    1700031F13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920551
    NCBI Gene: 73301
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:78213302-78394326 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 36.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1953 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920551
protein coding gene Chr8:78213297-78394326 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033804
protein coding gene Chr8:78816905-79005973 (+)
A/J MGP_AJ_G0033786
protein coding gene Chr8:75669269-75851289 (+)
AKR/J MGP_AKRJ_G0033713
protein coding gene Chr8:77950746-78132609 (+)
BALB/cJ MGP_BALBcJ_G0033780
protein coding gene Chr8:75780837-75964193 (+)
C3H/HeJ MGP_C3HHeJ_G0033489
protein coding gene Chr8:78556358-78742860 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034300
protein coding gene Chr8:81828870-82021744 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031241
protein coding gene Chr8:69758176-69947965 (+)
CAST/EiJ MGP_CASTEiJ_G0032820
protein coding gene Chr8:77879479-78085473 (+)
CBA/J MGP_CBAJ_G0033468
protein coding gene Chr8:84750650-84943916 (+)
DBA/2J MGP_DBA2J_G0033622
protein coding gene Chr8:75369668-75551625 (+)
FVB/NJ MGP_FVBNJ_G0033567
protein coding gene Chr8:74361432-74545216 (+)
LP/J MGP_LPJ_G0033711
protein coding gene Chr8:78893196-79084238 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033610
protein coding gene Chr8:87349561-87540744 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034317
protein coding gene Chr8:77946137-78138697 (+)
PWK/PhJ MGP_PWKPhJ_G0032524
protein coding gene Chr8:74581607-74827188 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032362
protein coding gene Chr8:76794233-76988032 (+)
WSB/EiJ MGP_WSBEiJ_G0032933
protein coding gene Chr8:78279205-78472409 (+)



Homology
more
  • Human Ortholog
    TTC29, tetratricopeptide repeat domain 29
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TTC29, tetratricopeptide repeat domain 29
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NYD-SP14, TBPP2A
  • Links
    NCBI Gene ID: 83894
    neXtProt AC: NX_Q8NA56
    UniProt: Q8NA56

  • Chr Location
    4q31.22; chr4:146706638-146945886 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 12918
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TTC29
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73301 NCBI Gene Model | MGI Sequence Detail 181025 C57BL/6J ±  kb
transcript NM_183096 RefSeq | MGI Sequence Detail 2450 C57BL/6  
polypeptide Q80VM3 UniProt | EBI | MGI Sequence Detail 471 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory