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Rassf6
Gene Detail
Symbol

Name
ID
Rassf6
Ras association (RalGDS/AF-6) domain family member 6
MGI:1920496
Synonyms
1600016B17Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
44.78 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:90603076-90640657 bp, - strand
From VEGA annotation of GRCm38

  37582 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37125  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RASSF6
Gene Tree: Rassf6

Human
homologs
RASSF6, Ras association (RalGDS/AF-6) domain family member 6
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 166824
neXtProt AC: NX_Q6ZTQ3

Human Chr (Location): 4q13.3; chr4:73571550-73620631 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Rassf6 interacts with 98 markers (Mir1b, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process apoptotic process, positive regulation of apoptotic process, ...
Component cellular_component
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (76)    Tissues (12)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 76
cDNA source data(19)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rassf6    NEW 
Molecular
reagents
All nucleic(19) cDNA(19)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000055490 (Evidence)
Ensembl Gene Model ENSMUSG00000029370 (Evidence)
Entrez Gene 73246 (Evidence)
UniGene 30172
DFCI TC1585650, TC1642823, TC1717964
DoTS DT.524759, DT.87042780, DT.97405577, DT.99845754
NIA Mouse Gene Index U118598
Consensus CDS Project CCDS39142.1, CCDS80327.1
International Mouse Phenotyping Consortium Status Rassf6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000055490 VEGA Gene Model | MGI Sequence Detail 37582 C57BL/6J ±  kb
transcript OTTMUST00000137340 VEGA | MGI Sequence Detail 1178 Not Applicable 
polypeptide OTTMUSP00000072348 VEGA | MGI Sequence Detail 341 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(22) UniProt(2)
Polymorphisms
SNPs within 2kb(367 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000159 Ras-associating (RA) domain
InterPro IPR011524 SARAH domain
InterPro IPR029071 Ubiquitin-related domain
Protein Ontology PR:000013767 ras association domain-containing protein 6
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory