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Rassf6
Gene Detail
Symbol

Name
ID
Rassf6
Ras association (RalGDS/AF-6) domain family member 6
MGI:1920496
Synonyms
1600016B17Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
44.78 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:90603076-90640487 bp, - strand
From NCBI annotation of GRCm38

  37412 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37125  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rassf6

Human
homologs
Human Homolog RASSF6, Ras association (RalGDS/AF-6) domain family member 6
NCBI Gene ID 166824
neXtProt AC  NX_Q6ZTQ3
Human Chr (Location)  4q13.3; chr4:73571550-73620631 (-)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Rassf6 interacts with 98 markers (Mir1b, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process apoptotic process, positive regulation of apoptotic process, ...
Component cellular_component
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (76)    Tissues (12)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 76
cDNA source data(19)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(19) cDNA(19)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000029370 (Evidence)
Entrez Gene73246 (Evidence)
UniGene30172
DFCITC1585650, TC1642823, TC1717964
DoTSDT.524759, DT.87042780, DT.97405577, DT.99845754
NIA Mouse Gene IndexU118598
Consensus CDS ProjectCCDS39142.1
International Mouse Knockout Project StatusRassf6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 73246 NCBI Gene Model | MGI Sequence Detail 37412 C57BL/6J ±  kb
transcript NM_028478 RefSeq | MGI Sequence Detail 1958 C57BL/6 
polypeptide Q80UQ2 UniProt | EBI | MGI Sequence Detail 353 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(23) UniProt(2)
Polymorphisms
SNPs within 2kb(365 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000159 Ras-association
InterPro IPR011524 SARAH domain
Protein Ontology PR:000013767 ras association domain-containing protein 6
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory