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3110082I17Rik Gene Detail
Summary
  • Symbol
    3110082I17Rik
  • Name
    RIKEN cDNA 3110082I17 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920462
    NCBI Gene: 73212
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr5:139359739-139460527 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      100789 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 78.45 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    C7orf50, chromosome 7 open reading frame 50
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C7orf50, chromosome 7 open reading frame 50
    Orthology source: HomoloGene, HGNC
  • Synonyms
    YCR016W
  • Links
    NCBI Gene ID: 84310
    neXtProt AC: NX_Q9BRJ6
    UniProt: Q9BRJ6

  • Chr Location
    7p22.3; chr7:978485-1138291 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035852 VEGA Gene Model | MGI Sequence Detail 100789 C57BL/6J ±  kb
transcript OTTMUST00000091859 VEGA | MGI Sequence Detail 1429 Not Applicable  
polypeptide OTTMUSP00000050643 VEGA | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    897 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR019327 Protein of unknown function DUF2373
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141188
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory