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3110082I17Rik Gene Detail
Summary
  • Symbol
    3110082I17Rik
  • Name
    RIKEN cDNA 3110082I17 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920462
    NCBI Gene: 73212
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:139359739-139460527 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 78.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    897 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920462
protein coding gene Chr5:139359739-139460534 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030282
protein coding gene Chr5:144330838-144443545 (-)
A/J MGP_AJ_G0030251
protein coding gene Chr5:138214417-138323114 (-)
AKR/J MGP_AKRJ_G0030183
protein coding gene Chr5:142519853-142631792 (-)
BALB/cJ MGP_BALBcJ_G0030268
protein coding gene Chr5:139463639-139565209 (-)
C3H/HeJ MGP_C3HHeJ_G0029979
protein coding gene Chr5:143299302-143406509 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030713
protein coding gene Chr5:149654057-149771672 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027931
protein coding gene Chr5:132078960-132181060 (-)
CAST/EiJ MGP_CASTEiJ_G0029384
protein coding gene Chr5:142709896-142818716 (-)
CBA/J MGP_CBAJ_G0029949
protein coding gene Chr5:155820708-155944425 (-)
DBA/2J MGP_DBA2J_G0030099
protein coding gene Chr5:138027754-138130014 (-)
FVB/NJ MGP_FVBNJ_G0030054
protein coding gene Chr5:137133606-137243620 (-)
LP/J MGP_LPJ_G0030185
protein coding gene Chr5:144945418-145052199 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030085
protein coding gene Chr5:158495174-158600698 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030753
protein coding gene Chr5:142335280-142444080 (-)
PWK/PhJ MGP_PWKPhJ_G0029099
protein coding gene Chr5:137027938-137137070 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028935
protein coding gene Chr5:140024078-140128885 (-)
WSB/EiJ MGP_WSBEiJ_G0029458
protein coding gene Chr5:143102819-143210727 (-)



Homology
more
  • Human Ortholog
    C7orf50, chromosome 7 open reading frame 50
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C7orf50, chromosome 7 open reading frame 50
    Orthology source: HomoloGene, HGNC
  • Synonyms
    YCR016W
  • Links
    NCBI Gene ID: 84310
    neXtProt AC: NX_Q9BRJ6
    UniProt: Q9BRJ6

  • Chr Location
    7p22.3; chr7:978485-1138291 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053553 Ensembl Gene Model | MGI Sequence Detail 100789 C57BL/6J ±  kb
transcript ENSMUST00000066052 Ensembl | MGI Sequence Detail 1429 Not Applicable  
polypeptide ENSMUSP00000069230 Ensembl | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR019327 Protein of unknown function DUF2373
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141188
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory