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Abracl Gene Detail
Summary
  • Symbol
    Abracl
  • Name
    ABRA C-terminal like
  • Synonyms
    1700028I04Rik, 3110003A17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920362
    NCBI Gene: 73112
Location & Maps
more
  • Sequence Map
    Chr10:18011263-18023252 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11990 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 7.39 cM, cytoband A2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ABRACL, ABRA C-terminal like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ABRACL, ABRA C-terminal like
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C6orf115, Costars, HSPC280, PRO2013
  • Links
    NCBI Gene ID: 58527
    neXtProt AC: NX_Q9P1F3

  • Chr Location
    6q24.1; chr6:139028682-139043302 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    6
  • Targeted
    2
  • Genomic Mutations
    1 involving Abracl
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078453 Ensembl Gene Model | MGI Sequence Detail 11990 C57BL/6J ±  kb
transcript ENSMUST00000020002 Ensembl | MGI Sequence Detail 807 Not Applicable  
polypeptide ENSMUSP00000020002 Ensembl | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    108 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000031818 costars family protein ABRACL
  • InterPro Domains
    IPR027817 Costars domain
Molecular
Reagents
less
  • All nucleic 55
    cDNA 53
    Primer pair 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919503
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory