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Cldn34c1 Gene Detail
Summary
  • Symbol
    Cldn34c1
  • Name
    claudin 34C1
  • Synonyms
    3110007F17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920311
    NCBI Gene: 73061
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:123103523-123145654 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 49.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920311
protein coding gene ChrX:123103495-123188795 (.)
129S1/SvImJ no annotation
A/J MGP_AJ_G0036029
protein coding gene ChrX:122640996-122647660 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0036021
protein coding gene ChrX:121121877-121124911 (-)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035702
protein coding gene ChrX:130584819-130623873 (-)
DBA/2J MGP_DBA2J_G0035854
protein coding gene ChrX:119674354-119683652 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0035947
protein coding gene ChrX:121963610-121967783 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036572
protein coding gene ChrX:120025779-120027745 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0034536
protein coding gene ChrX:105012349-105015409 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73061 NCBI Gene Model | MGI Sequence Detail 42132 C57BL/6J ±  kb
transcript NM_028426 RefSeq | MGI Sequence Detail 3317 C57BL/6  
polypeptide NP_001297581 RefSeq | MGI Sequence Detail 257 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR006187 Claudin
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 8
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory