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2900079G21Rik Gene Detail
Summary
  • Symbol
    2900079G21Rik
  • Name
    RIKEN cDNA 2900079G21 gene
  • Synonyms
    Gm6179
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920268
    NCBI Gene: 620760
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:112234277-112348925 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 62.55 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    674 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920268
lncRNA gene Chr9:112234277-112348925 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007514
lincRNA gene Chr9:114510891-114630428 (+)
A/J MGP_AJ_G0007509
lincRNA gene Chr9:110297668-110411307 (+)
AKR/J MGP_AKRJ_G0007481
lincRNA gene Chr9:113066003-113176364 (+)
BALB/cJ MGP_BALBcJ_G0007486
lincRNA gene Chr9:110084016-110199632 (+)
C3H/HeJ MGP_C3HHeJ_G0007431
lincRNA gene Chr9:113570185-113700527 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007658
lincRNA gene Chr9:117638899-117764168 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006839
lincRNA gene Chr9:107499289-107606619 (+)
CAST/EiJ MGP_CASTEiJ_G0007334
lincRNA gene Chr9:113389886-113518501 (+)
CBA/J MGP_CBAJ_G0007412
lincRNA gene Chr9:121973723-122112561 (+)
DBA/2J MGP_DBA2J_G0007438
lincRNA gene Chr9:109754842-109864275 (+)
FVB/NJ MGP_FVBNJ_G0007454
lincRNA gene Chr9:108591066-108702668 (+)
LP/J MGP_LPJ_G0007518
lincRNA gene Chr9:114798407-114919113 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007435
lincRNA gene Chr9:123243386-123371748 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007663
lincRNA gene Chr9:113416752-113541921 (+)
PWK/PhJ MGP_PWKPhJ_G0007275
lincRNA gene Chr9:110019231-110133598 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007179
lincRNA gene Chr9:113531637-113655876 (+)
WSB/EiJ MGP_WSBEiJ_G0007394
lincRNA gene Chr9:113295954-113412022 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 620760 NCBI Gene Model | MGI Sequence Detail 114649 C57BL/6J ±  kb
transcript NR_033432 RefSeq | MGI Sequence Detail 2961 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
Other
Accession IDs
less
MGI:3779565
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory