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Fbxo47
Gene Detail
Symbol

Name
ID
Fbxo47
F-box protein 47
MGI:1920223
Synonyms
2900052P03Rik, LOC380724
Feature Type
protein coding gene
Genetic Map
Chromosome 11
61.14 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:97853826-97884154 bp, - strand
From VEGA annotation of GRCm38

  30329 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:47677  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Fbxo47

Human
homologs
Human Homolog FBXO47, F-box protein 47
NCBI Gene ID 494188
neXtProt AC  NX_Q5MNV8
Human Chr (Location)  chr17:38936432-38967402 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(33) : Gene trapped(29) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Fbxo47 interacts with 157 markers (Mir16-1, Mir18, Mir18b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(8)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000002775 (Evidence)
Ensembl Gene ModelENSMUSG00000070336 (Evidence)
Entrez Gene72973 (Evidence)
UniGene245939
DFCITC1662390, TC1600799
DoTSDT.55222001, DT.55241573
NIA Mouse Gene IndexU033351
Consensus CDS ProjectCCDS36299.1
International Mouse Knockout Project StatusFbxo47
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002775 VEGA Gene Model | MGI Sequence Detail 30329 C57BL/6J ±  kb
transcript OTTMUST00000005560 VEGA | MGI Sequence Detail 2162 Not Applicable 
polypeptide OTTMUSP00000002655 VEGA | MGI Sequence Detail 451 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(13) UniProt(1)
Polymorphisms
SNPs within 2kb(114 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001810 F-box domain, cyclin-like
Protein Ontology PR:000007415 F-box only protein 47
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)
Other
accession IDs
MGI:2686408

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory