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Hepacam
Gene Detail
Symbol

Name
ID
Hepacam
hepatocyte cell adhesion molecule
MGI:1920177
Synonyms
2900042E01Rik, Glialcam
Feature Type
protein coding gene
Genetic Map
Chromosome 9
20.76 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:37367368-37386572 bp, + strand
From VEGA annotation of GRCm38

  19205 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17652  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: HEPACAM
Gene Tree: Hepacam

Human
homologs
HEPACAM, hepatic and glial cell adhesion molecule
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 220296
neXtProt AC: NX_Q14CZ8

Human Synonyms: GlialCAM, MLC2A, MLC2B

Human Chr (Location): 11q24.2; chr11:124919193-124936412 (-)  GRCh38.p2

Disease Associations: (3) Diseases Associated with Human HEPACAM

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(2) Targeted(5)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Hepacam interacts with 226 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cell adhesion, cell cycle, ...
Component axon, cell-cell junction, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (163)    Tissues (94)    Images (15)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 163
cDNA source data(11)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase hepacam ; ZFIN hepacama    NEW 
Molecular
reagents
All nucleic(12) cDNA(11) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000016793 (Evidence)
Ensembl Gene Model ENSMUSG00000046240 (Evidence)
Entrez Gene 72927 (Evidence)
UniGene 266133
DFCI TC1585732, TC1673602, TC1601714
DoTS DT.60104467
NIA Mouse Gene Index U010257
Consensus CDS Project CCDS22976.1
International Mouse Phenotyping Consortium Status Hepacam
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016793 VEGA Gene Model | MGI Sequence Detail 19205 C57BL/6J ±  kb
transcript OTTMUST00000040747 VEGA | MGI Sequence Detail 3327 Not Applicable 
polypeptide OTTMUSP00000018225 VEGA | MGI Sequence Detail 418 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(195 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR003598 Immunoglobulin subtype 2
InterPro IPR013106 Immunoglobulin V-set
Protein Ontology PR:000008510 hepatocyte cell adhesion molecule
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:214327 Sirisi S, et al., Megalencephalic leukoencephalopathy with subcortical cysts protein 1 regulates glial surface localization of GLIALCAM from fish to humans. Hum Mol Genet. 2014 Oct 1;23(19):5069-86
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory