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Hepacam
Gene Detail
Symbol

Name
ID
Hepacam
hepatocyte cell adhesion molecule
MGI:1920177
Synonyms
2900042E01Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
20.76 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:37367368-37386572 bp, + strand
From VEGA annotation of GRCm38

  19205 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17652  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Hepacam

Human
homologs
Human Homolog HEPACAM, hepatic and glial cell adhesion molecule
NCBI Gene ID 220296
neXtProt AC  NX_Q14CZ8
Human Synonyms  GlialCAM, MLC2A, MLC2B
Human Chr (Location)  11q24.2; chr11:124919193-124936412 (-)  GRCh38
Disease Associations  (3) Diseases Associated with Human HEPACAM
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Hepacam interacts with 226 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cell adhesion, cell cycle, ...
Component axon, cell-cell junction, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (163)    Tissues (94)    Images (15)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 163
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(11) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000016793 (Evidence)
Ensembl Gene ModelENSMUSG00000046240 (Evidence)
Entrez Gene72927 (Evidence)
UniGene266133
DFCITC1673602, TC1601714, TC1585732
DoTSDT.60104467
NIA Mouse Gene IndexU010257
Consensus CDS ProjectCCDS22976.1
International Mouse Knockout Project StatusHepacam
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016793 VEGA Gene Model | MGI Sequence Detail 19205 C57BL/6J ±  kb
transcript OTTMUST00000040747 VEGA | MGI Sequence Detail 3327 Not Applicable 
polypeptide OTTMUSP00000018225 VEGA | MGI Sequence Detail 418 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(195 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR003598 Immunoglobulin subtype 2
InterPro IPR013106 Immunoglobulin V-set
Protein Ontology PR:000008510 hepatocyte cell adhesion molecule
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory