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Kctd17 Gene Detail
Summary
  • Symbol
    Kctd17
  • Name
    potassium channel tetramerisation domain containing 17
  • Synonyms
    2900008M13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920094
    NCBI Gene: 72844
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:78428564-78439303 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 37.49 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920094
protein coding gene Chr15:78428564-78439303 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022043
protein coding gene Chr15:78624010-78634371 (+)
A/J MGP_AJ_G0022004
protein coding gene Chr15:75926884-75937267 (+)
AKR/J MGP_AKRJ_G0021979
protein coding gene Chr15:78017564-78028321 (+)
BALB/cJ MGP_BALBcJ_G0022010
protein coding gene Chr15:75900165-75910537 (+)
C3H/HeJ MGP_C3HHeJ_G0021781
protein coding gene Chr15:78033039-78043432 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022453
protein coding gene Chr15:81725509-81735829 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019983
protein coding gene Chr15:72424660-72435183 (+)
CAST/EiJ MGP_CASTEiJ_G0021302
protein coding gene Chr15:78710406-78720769 (+)
CBA/J MGP_CBAJ_G0021746
protein coding gene Chr15:84245880-84256231 (+)
DBA/2J MGP_DBA2J_G0021875
protein coding gene Chr15:75410234-75422315 (+)
FVB/NJ MGP_FVBNJ_G0021853
protein coding gene Chr15:74411168-74422287 (+)
LP/J MGP_LPJ_G0021943
protein coding gene Chr15:78829303-78839654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021873
protein coding gene Chr15:89440990-89451359 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022467
protein coding gene Chr15:78059292-78069651 (+)
PWK/PhJ MGP_PWKPhJ_G0021044
protein coding gene Chr15:75409371-75419797 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020881
protein coding gene Chr15:77831640-77841975 (+)
WSB/EiJ MGP_WSBEiJ_G0021354
protein coding gene Chr15:78411780-78423741 (+)



Homology
more
  • Human Ortholog
    KCTD17, potassium channel tetramerization domain containing 17
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KCTD17, potassium channel tetramerization domain containing 17
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79734
    neXtProt AC: NX_Q8N5Z5
    UniProt: Q8N5Z5

  • Chr Location
    22q12.3; chr22:37051725-37063390 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human KCTD17 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    24 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    1
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Kctd17
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 72844 NCBI Gene Model | MGI Sequence Detail 10740 C57BL/6J ±  kb
transcript NR_110357 RefSeq | MGI Sequence Detail 1743 C57BL/6  
polypeptide NP_001276600 RefSeq | MGI Sequence Detail 250 Not Specified  
For the selected sequence
Protein
Information
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  • UniProt
    9 Sequences
  • InterPro Domains
    IPR000210 BTB/POZ domain
    IPR003131 Potassium channel tetramerisation-type BTB domain
    IPR011333 SKP1/BTB/POZ domain superfamily
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
Other
Accession IDs
less
MGI:2145906, MGI:2146244, MGI:2146317
References
more
  • Summaries
    All 46
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 2
    Phenotypes 24
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:256929 Otto T, et al., Cell cycle-targeting microRNAs promote differentiation by enforcing cell-cycle exit. Proc Natl Acad Sci U S A. 2017 Oct 3;114(40):10660-10665

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory