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Tmem216
Gene Detail
Symbol

Name
ID
Tmem216
transmembrane protein 216
MGI:1920020
Synonyms
1110017C22Rik, 2810441K11Rik, 4921533J23Rik, A930021F15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 19
6.60 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:10533865-10556238 bp, - strand
From VEGA annotation of GRCm38

  22374 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9541  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TMEM216
Gene Tree: Tmem216

Human
homologs
TMEM216, transmembrane protein 216
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 51259
neXtProt AC: NX_Q9P0N5

Human Synonyms: HSPC244

Human Chr (Location): 11q13.1; chr11:61391687-61398863 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human TMEM216

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tmem216 interacts with 73 markers (Mir18, Mir18b, Mir24-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process cell projection organization, cilium assembly, ...
Component cell projection, ciliary transition zone, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(38)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100490116    NEW 
Molecular
reagents
All nucleic(41) cDNA(41)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000033090 (Evidence)
Ensembl Gene Model ENSMUSG00000024667 (Evidence)
Entrez Gene 68642 (Evidence)
UniGene 31236
DFCI TC1579394, TC1594110
DoTS DT.490906, DT.101376443
NIA Mouse Gene Index U038804
Consensus CDS Project CCDS37913.1, CCDS70934.1
International Mouse Phenotyping Consortium Status Tmem216
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033090 VEGA Gene Model | MGI Sequence Detail 22374 C57BL/6J ±  kb
transcript OTTMUST00000082659 VEGA | MGI Sequence Detail 935 Not Applicable 
polypeptide OTTMUSP00000044340 VEGA | MGI Sequence Detail 141 Not Applicable 

For the selected sequences
All sequences(52) RefSeq(12) UniProt(1)
Polymorphisms
SNPs within 2kb(121 from dbSNP Build 137)    SNPs within 2kb including multiple locations(123)
Protein-related
information
ResourceIDDescription
InterPro IPR019184 Uncharacterised protein family, transmembrane-17
Protein Ontology PR:000030393 transmembrane protein 216
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:176174 Garcia-Gonzalo FR, et al., A transition zone complex regulates mammalian ciliogenesis and ciliary membrane composition. Nat Genet. 2011 Aug;43(8):776-84
All references(30)
Other
accession IDs
MGI:1915892, MGI:1918182, MGI:1924512, MGI:2147568

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory