About   Help   FAQ
C1qtnf6 Gene Detail
Summary
  • Symbol
    C1qtnf6
  • Name
    C1q and tumor necrosis factor related protein 6
  • Synonyms
    2810036M19Rik, CTRP6
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919959
    NCBI Gene: 72709
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:78523346-78531416 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 37.55 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919959
protein coding gene Chr15:78523346-78532136 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022046
protein coding gene Chr15:78720941-78727219 (-)
A/J MGP_AJ_G0022007
protein coding gene Chr15:76022236-76028536 (-)
AKR/J MGP_AKRJ_G0021982
protein coding gene Chr15:78112290-78118576 (-)
BALB/cJ MGP_BALBcJ_G0022013
protein coding gene Chr15:75995413-76001693 (-)
C3H/HeJ MGP_C3HHeJ_G0021784
protein coding gene Chr15:78128768-78135055 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022456
protein coding gene Chr15:81821430-81827709 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019986
protein coding gene Chr15:72520948-72527318 (-)
CAST/EiJ MGP_CASTEiJ_G0021305
protein coding gene Chr15:78811619-78817920 (-)
CBA/J MGP_CBAJ_G0021749
protein coding gene Chr15:84343580-84351114 (-)
DBA/2J MGP_DBA2J_G0021878
protein coding gene Chr15:75507115-75513392 (-)
FVB/NJ MGP_FVBNJ_G0021856
protein coding gene Chr15:74511041-74517319 (-)
LP/J MGP_LPJ_G0021946
protein coding gene Chr15:78928708-78935013 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021876
protein coding gene Chr15:89540984-89547294 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022470
protein coding gene Chr15:78155976-78162285 (-)
PWK/PhJ MGP_PWKPhJ_G0021047
protein coding gene Chr15:75506198-75512508 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020884
protein coding gene Chr15:77930471-77936785 (-)
WSB/EiJ MGP_WSBEiJ_G0021357
protein coding gene Chr15:78512701-78519004 (-)



Homology
more
  • Human Ortholog
    C1QTNF6, C1q and TNF related 6
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C1QTNF6, C1q and TNF related 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CTFP6, CTRP6, ZACRP6
  • Links
    NCBI Gene ID: 114904
    neXtProt AC: NX_Q9BXI9
    UniProt: Q9BXI9

  • Chr Location
    22q12.3; chr22:37180166-37199400 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    3 involving C1qtnf6
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022440 Ensembl Gene Model | MGI Sequence Detail 8071 C57BL/6J ±  kb
transcript ENSMUST00000023075 Ensembl | MGI Sequence Detail 2402 Not Applicable  
polypeptide ENSMUSP00000023075 Ensembl | MGI Sequence Detail 264 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 55
    cDNA 55

    Microarray probesets 4
Other
Accession IDs
less
MGI:2145996, MGI:2146250
References
more
  • Summaries
    All 49
    Diseases 1
    Gene Ontology 2
    Phenotypes 25
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:245812 Lei X, et al., C1q/TNF-related protein 6 (CTRP6) links obesity to adipose tissue inflammation and insulin resistance. J Biol Chem. 2017 Sep 08;292(36):14836-14850

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/19/2019
MGI 6.13
The Jackson Laboratory