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Zcchc12 Gene Detail
Summary
  • Symbol
    Zcchc12
  • Name
    zinc finger, CCHC domain containing 12
  • Synonyms
    2810028A01Rik, Sizn1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919943
    NCBI Gene: 72693
Location & Maps
more
  • Sequence Map
    ChrX:36195904-36199158 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3255 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 20.58 cM
  • Detailed Genetic Map ± 1 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ZCCHC12, zinc finger CCHC-type containing 12
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZCCHC12, zinc finger CCHC-type containing 12
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PNMA7A, SIZN, SIZN1
  • Links
    NCBI Gene ID: 170261
    neXtProt AC: NX_Q6PEW1

  • Chr Location
    Xq24; chrX:118823824-118826968 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017218 VEGA Gene Model | MGI Sequence Detail 3255 C57BL/6J ±  kb
transcript OTTMUST00000041688 VEGA | MGI Sequence Detail 2181 Not Applicable  
polypeptide OTTMUSP00000018724 VEGA | MGI Sequence Detail 402 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    7 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000017605 zinc finger CCHC domain-containing protein 12
  • InterPro Domains
    IPR026523 Paraneoplastic antigen Ma
    IPR001878 Zinc finger, CCHC-type
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2147978
References
more
  • Summaries
    All 31
    Developmental Gene Expression 7
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:224836 Hoch RV, et al., OTX2 Transcription Factor Controls Regional Patterning within the Medial Ganglionic Eminence and Regional Identity of the Septum. Cell Rep. 2015 Jul 21;12(3):482-94

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory