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Zcchc12 Gene Detail
Summary
  • Symbol
    Zcchc12
  • Name
    zinc finger, CCHC domain containing 12
  • Synonyms
    2810028A01Rik, Sizn1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919943
    NCBI Gene: 72693
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:36195904-36199158 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 20.58 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919943
protein coding gene ChrX:36195904-36199158 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035617
protein coding gene ChrX:31091938-31097797 (+)
A/J MGP_AJ_G0035594
protein coding gene ChrX:31193590-31196881 (+)
AKR/J MGP_AKRJ_G0035527
protein coding gene ChrX:31839045-31843078 (+)
BALB/cJ MGP_BALBcJ_G0035587
protein coding gene ChrX:30926298-30929466 (+)
C3H/HeJ MGP_C3HHeJ_G0035305
protein coding gene ChrX:31422375-31427639 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036123
protein coding gene ChrX:31711098-31716382 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032985
protein coding gene ChrX:29335700-29339000 (+)
CAST/EiJ MGP_CASTEiJ_G0034596
protein coding gene ChrX:19573513-19576817 (+)
CBA/J MGP_CBAJ_G0035274
protein coding gene ChrX:32567566-32572293 (+)
DBA/2J MGP_DBA2J_G0035426
protein coding gene ChrX:31016602-31020068 (+)
FVB/NJ MGP_FVBNJ_G0035372
protein coding gene ChrX:30772262-30776067 (+)
LP/J MGP_LPJ_G0035508
protein coding gene ChrX:31456796-31460505 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035416
protein coding gene ChrX:33030862-33034590 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036130
protein coding gene ChrX:31062557-31066579 (+)
PWK/PhJ MGP_PWKPhJ_G0034297
protein coding gene ChrX:19073402-19076590 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034138
protein coding gene ChrX:20065594-20068876 (+)
WSB/EiJ MGP_WSBEiJ_G0034731
protein coding gene ChrX:30870525-30875102 (+)



Homology
more
  • Human Ortholog
    ZCCHC12, zinc finger CCHC-type containing 12
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZCCHC12, zinc finger CCHC-type containing 12
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PNMA7A, SIZN, SIZN1
  • Links
    NCBI Gene ID: 170261
    neXtProt AC: NX_Q6PEW1
    UniProt: Q6PEW1

  • Chr Location
    Xq24; chrX:118823743-118826973 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72693 NCBI Gene Model | MGI Sequence Detail 3255 C57BL/6J ±  kb
transcript NM_028325 RefSeq | MGI Sequence Detail 2210 C57BL/6  
polypeptide Q9CZA5 UniProt | EBI | MGI Sequence Detail 402 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2147978
References
more
  • Summaries
    All 36
    Developmental Gene Expression 10
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:262096 Johnson JA, et al., Fank1 and Jazf1 promote multiciliated cell differentiation in the mouse airway epithelium. Biol Open. 2018 Apr 16;7(4)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory