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Ccdc12 Gene Detail
Summary
  • Symbol
    Ccdc12
  • Name
    coiled-coil domain containing 12
  • Synonyms
    2700094L05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919904
    NCBI Gene: 72654
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr9:110656503-110711606 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      55104 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 60.37 cM, cytoband F2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CCDC12, coiled-coil domain containing 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC12, coiled-coil domain containing 12
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 151903
    neXtProt AC: NX_Q8WUD4
    UniProt: Q8WUD4

  • Chr Location
    3p21.31; chr3:46917905-46982031 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41751
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CCDC12
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000052492 VEGA Gene Model | MGI Sequence Detail 55104 C57BL/6J ±  kb
transcript OTTMUST00000131636 VEGA | MGI Sequence Detail 834 Not Applicable  
polypeptide OTTMUSP00000070327 VEGA | MGI Sequence Detail 166 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    351 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 60
    cDNA 60

    Microarray probesets 7
Other
Accession IDs
less
MGI:2143378
References
more
  • Summaries
    All 32
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory