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2810006K23Rik
Gene Detail
Symbol

Name
ID
2810006K23Rik
RIKEN cDNA 2810006K23 gene
MGI:1919900
Feature Type
protein coding gene
Genetic Map
Chromosome 5
63.52 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:124328089-124341844 bp, + strand
From VEGA annotation of GRCm38

  13756 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:35106  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: C12orf65
Gene Tree: 2810006K23Rik

Human
homologs
C12orf65, chromosome 12 open reading frame 65
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 91574
neXtProt AC: NX_Q9H3J6

Human Synonyms: COXPD7, SPG55

Human Chr (Location): 12q24.31; chr12:123233297-123257959 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human C12orf65

Mutations,
alleles, and
phenotypes
All mutations/alleles(22) : Gene trapped(21) Targeted(1)
Interactions
2810006K23Rik interacts with 144 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process translation, translational termination
Component mitochondrion
Function translation release factor activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (4)    Tissues (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 2
RT-PCR 2
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(12) Primer pair(1) Other(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000024433 (Evidence)
Ensembl Gene Model ENSMUSG00000047635 (Evidence)
Entrez Gene 72650 (Evidence)
UniGene 121658
DFCI TC1589245, TC1611796
DoTS DT.55168044, DT.97353649
NIA Mouse Gene Index U006184
PDB 2RSM
Consensus CDS Project CCDS51647.1, CCDS51648.1
International Mouse Phenotyping Consortium Status 2810006K23Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024433 VEGA Gene Model | MGI Sequence Detail 13756 C57BL/6J ±  kb
transcript OTTMUST00000059902 VEGA | MGI Sequence Detail 1677 Not Applicable 
polypeptide OTTMUSP00000029181 VEGA | MGI Sequence Detail 184 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(115 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR014720 Double-stranded RNA-binding domain
InterPro IPR000352 Peptide chain release factor class I/class II
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:160012 Jerome-Majewska LA, et al., The trafficking protein Tmed2/p24beta(1) is required for morphogenesis of the mouse embryo and placenta. Dev Biol. 2010 May 1;341(1):154-66
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory