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Lins1 Gene Detail
Summary
  • Symbol
    Lins1
  • Name
    lines homolog 1
  • Synonyms
    2700083B01Rik, Lins, Wins2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919885
    NCBI Gene: 72635
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:66689889-66717256 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 36.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    293 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919885
protein coding gene Chr7:66689817-66717256 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032354
protein coding gene Chr7:67923153-67950751 (+)
A/J MGP_AJ_G0032333
protein coding gene Chr7:66527380-66554300 (+)
AKR/J MGP_AKRJ_G0032269
protein coding gene Chr7:67943154-67971126 (+)
BALB/cJ MGP_BALBcJ_G0032345
protein coding gene Chr7:66267757-66295082 (+)
C3H/HeJ MGP_C3HHeJ_G0032058
protein coding gene Chr7:68614073-68641328 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032837
protein coding gene Chr7:70835499-70867071 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029844
protein coding gene Chr7:69422829-69449148 (+)
CAST/EiJ MGP_CASTEiJ_G0031386
protein coding gene Chr7:59296176-59328273 (+)
CBA/J MGP_CBAJ_G0032024
protein coding gene Chr7:73050859-73079827 (+)
DBA/2J MGP_DBA2J_G0032179
protein coding gene Chr7:65248985-65278142 (+)
FVB/NJ MGP_FVBNJ_G0032134
protein coding gene Chr7:65375474-65402642 (+)
LP/J MGP_LPJ_G0032260
protein coding gene Chr7:69140273-69174654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032171
protein coding gene Chr7:73291214-73320131 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032855
protein coding gene Chr7:67296038-67326873 (+)
PWK/PhJ MGP_PWKPhJ_G0031106
protein coding gene Chr7:58290967-58320207 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030947
protein coding gene Chr7:54336067-54367872 (+)
WSB/EiJ MGP_WSBEiJ_G0031504
protein coding gene Chr7:67641277-67672161 (+)



Homology
more
  • Human Ortholog
    LINS1, lines homolog 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LINS1, lines homolog 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LINS, MRT27, WINS1
  • Links
    NCBI Gene ID: 55180
    neXtProt AC: NX_Q8NG48
    UniProt: Q8NG48

  • Chr Location
    15q26.3; chr15:100566914-100602440 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 10034
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LINS1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human LINS1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053091 Ensembl Gene Model | MGI Sequence Detail 27368 C57BL/6J ±  kb
transcript ENSMUST00000121777 Ensembl | MGI Sequence Detail 2729 Not Applicable  
polypeptide ENSMUSP00000112404 Ensembl | MGI Sequence Detail 764 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 39
    cDNA 39

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142255
References
more
  • Summaries
    All 38
    Gene Ontology 1
    Phenotypes 14
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory