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Smim18 Gene Detail
Summary
  • Symbol
    Smim18
  • Name
    small integral membrane protein 18
  • Synonyms
    2700090O03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919882
    NCBI Gene: 72632
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:33742112-33747770 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 20.80 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919882
protein coding gene Chr8:33742112-33748020 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033528
protein coding gene Chr8:32204467-32209947 (-)
A/J MGP_AJ_G0033508
protein coding gene Chr8:30971585-30977223 (-)
AKR/J MGP_AKRJ_G0033432
protein coding gene Chr8:31939611-31946831 (-)
BALB/cJ MGP_BALBcJ_G0033504
protein coding gene Chr8:31092915-31098583 (-)
C3H/HeJ MGP_C3HHeJ_G0033216
protein coding gene Chr8:32264095-32271247 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034020
protein coding gene Chr8:33442886-33448544 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030969
protein coding gene Chr8:27975411-27981877 (-)
CAST/EiJ MGP_CASTEiJ_G0032543
protein coding gene Chr8:31703078-31708756 (-)
CBA/J MGP_CBAJ_G0033194
protein coding gene Chr8:34753569-34759218 (-)
DBA/2J MGP_DBA2J_G0033347
protein coding gene Chr8:30949866-30955354 (-)
FVB/NJ MGP_FVBNJ_G0033292
protein coding gene Chr8:30613662-30619231 (-)
LP/J MGP_LPJ_G0033437
protein coding gene Chr8:32169236-32174898 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033334
protein coding gene Chr8:34282838-34289965 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034039
protein coding gene Chr8:32029535-32035193 (-)
PWK/PhJ MGP_PWKPhJ_G0032255
protein coding gene Chr8:30466248-30472028 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032086
protein coding gene Chr8:31295202-31300943 (-)
WSB/EiJ MGP_WSBEiJ_G0032659
protein coding gene Chr8:32162535-32169765 (-)



Homology
more
  • Human Ortholog
    SMIM18, small integral membrane protein 18
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SMIM18, small integral membrane protein 18
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100507341
    neXtProt AC: NX_P0DKX4
    UniProt: P0DKX4

  • Chr Location
    chr8:30637771-30645956 (+)  GRCh38.p7

Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094500 Ensembl Gene Model | MGI Sequence Detail 5659 C57BL/6J ±  kb
transcript ENSMUST00000179364 Ensembl | MGI Sequence Detail 587 Not Applicable  
polypeptide ENSMUSP00000136891 Ensembl | MGI Sequence Detail 93 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031671 Protein of unknown function DUF4713
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:2142621
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory