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Hoxaas3 Gene Detail
Summary
  • Symbol
    Hoxaas3
  • Name
    Hoxa cluster antisense RNA 3
  • Synonyms
    2700086A05Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1919878
    NCBI Gene: 72628
Location & Maps
more
  • Sequence Map
    Chr6:52175217-52215076 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      39860 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 25.40 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    HOXA-AS3, HOXA cluster antisense RNA 3
  • Human Ortholog
    HOXA-AS3, HOXA cluster antisense RNA 3
    Orthology source: HGNC
  • Synonyms
    HOXA6as
  • Links
    NCBI Gene ID: 100133311

  • Chr Location
    7p15.2; chr7:27140364-27155928 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018869 VEGA Gene Model | MGI Sequence Detail 39860 C57BL/6J ±  kb
transcript OTTMUST00000045388 VEGA | MGI Sequence Detail 2207 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    131 from dbSNP Build 142
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 21
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:207500 Berlivet S, et al., Clustering of tissue-specific sub-TADs accompanies the regulation of HoxA genes in developing limbs. PLoS Genet. 2013 Dec;9(12):e1004018

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/08/2017
MGI 6.10
The Jackson Laboratory