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Pdzd11 Gene Detail
Summary
  • Symbol
    Pdzd11
  • Name
    PDZ domain containing 11
  • Synonyms
    1810012H22Rik, 2310079D11Rik, 2700099C19Rik, Pdzk11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919871
    NCBI Gene: 72621
  • Gene Overview
    MyGene.info: PDZD11
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:100622880-100625974 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 43.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919871
protein coding gene ChrX:100622880-100626568 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035946
protein coding gene ChrX:97082382-97086067 (-)
A/J MGP_AJ_G0035931
protein coding gene ChrX:97126025-97129710 (-)
AKR/J MGP_AKRJ_G0035847
protein coding gene ChrX:99911327-99915012 (-)
BALB/cJ MGP_BALBcJ_G0035914
protein coding gene ChrX:95870235-95873920 (-)
C3H/HeJ MGP_C3HHeJ_G0035623
protein coding gene ChrX:97514252-97517937 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036443
protein coding gene ChrX:99994800-99998485 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033273
protein coding gene ChrX:94899254-94902682 (-)
CAST/EiJ MGP_CASTEiJ_G0034910
protein coding gene ChrX:81817258-81820941 (-)
CBA/J MGP_CBAJ_G0035598
protein coding gene ChrX:103089278-103092963 (-)
DBA/2J MGP_DBA2J_G0035752
protein coding gene ChrX:96331869-96335554 (-)
FVB/NJ MGP_FVBNJ_G0035690
protein coding gene ChrX:95731443-95735128 (-)
LP/J MGP_LPJ_G0035842
protein coding gene ChrX:98064363-98068048 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035725
protein coding gene ChrX:107619955-107623640 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036470
protein coding gene ChrX:96799156-96802846 (-)
PWK/PhJ MGP_PWKPhJ_G0034609
protein coding gene ChrX:79437456-79441145 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034437
protein coding gene ChrX:82704803-82708472 (-)
WSB/EiJ MGP_WSBEiJ_G0035049
protein coding gene ChrX:95515973-95519658 (-)



Homology
more
  • Human Ortholog
    PDZD11, PDZ domain containing 11
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PDZD11, PDZ domain containing 11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AIPP1, PDZK11, PISP
  • Links
    NCBI Gene ID: 51248
    neXtProt AC: NX_Q5EBL8
    UniProt: Q5EBL8

  • Chr Location
    Xq13.1; chrX:70286361-70290040 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9530
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PDZD11
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72621 NCBI Gene Model | MGI Sequence Detail 3095 C57BL/6J ±  kb
transcript NM_028303 RefSeq | MGI Sequence Detail 1101 C57BL/6  
polypeptide Q9CZG9 UniProt | EBI | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 5
Other
Accession IDs
less
MGI:1917012, MGI:1919692, MGI:2147935
References
more
  • Summaries
    All 28
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234192 Guerrera D, et al., PLEKHA7 Recruits PDZD11 to Adherens Junctions to Stabilize Nectins. J Biol Chem. 2016 May 20;291(21):11016-29

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory