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2700069I18Rik Gene Detail
Summary
  • Symbol
    2700069I18Rik
  • Name
    RIKEN cDNA 2700069I18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919858
    NCBI Gene: 72608
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:5177824-5220823 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 1.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    204 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919858
lncRNA gene Chr3:5177586-5220841 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003718
antisense lncRNA gene Chr3:1932720-1979250 (-)
A/J MGP_AJ_G0003699
antisense lncRNA gene Chr3:2314272-2357801 (-)
AKR/J MGP_AKRJ_G0003677
antisense lncRNA gene Chr3:2083443-2141431 (-)
BALB/cJ MGP_BALBcJ_G0003688
antisense lncRNA gene Chr3:2013401-2057826 (-)
C3H/HeJ MGP_C3HHeJ_G0003635
antisense lncRNA gene Chr3:2320536-2365353 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003827
antisense lncRNA gene Chr3:2409449-2457068 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003332
antisense lncRNA gene Chr3:1607753-1652391 (-)
CAST/EiJ MGP_CASTEiJ_G0003598
antisense lncRNA gene Chr3:2393943-2444612 (-)
CBA/J MGP_CBAJ_G0003632
antisense lncRNA gene Chr3:2131788-2181111 (-)
DBA/2J MGP_DBA2J_G0003639
antisense lncRNA gene Chr3:1913170-1957981 (-)
FVB/NJ MGP_FVBNJ_G0003661
antisense lncRNA gene Chr3:1856308-1899658 (-)
LP/J MGP_LPJ_G0003718
antisense lncRNA gene Chr3:2467430-2512710 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003649
antisense lncRNA gene Chr3:2722528-2794571 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003828
antisense lncRNA gene Chr3:1903221-1948773 (-)
PWK/PhJ MGP_PWKPhJ_G0003554
antisense lncRNA gene Chr3:2181477-2226548 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003496
antisense lncRNA gene Chr3:2058773-2107915 (-)
WSB/EiJ MGP_WSBEiJ_G0003633
antisense lncRNA gene Chr3:1933867-1985104 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72608 NCBI Gene Model | MGI Sequence Detail 43000 C57BL/6J ±  kb
transcript NR_045905 RefSeq | MGI Sequence Detail 782 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory