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2700046A07Rik Gene Detail
Summary
  • Symbol
    2700046A07Rik
  • Name
    RIKEN cDNA 2700046A07 gene
  • Synonyms
    A330042I05Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919803
    NCBI Gene: 78449
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:62884745-62889418 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 35.73 cM, cytoband D3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919803
 lncRNA gene Chr18:62884745-62889418 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005795
 lincRNA gene Chr18:62696123-62702405 (-)
A/J MGP_AJ_G0005784
 lincRNA gene Chr18:60025432-60031271 (-)
AKR/J MGP_AKRJ_G0005761
 lincRNA gene Chr18:61678383-61682850 (-)
BALB/cJ MGP_BALBcJ_G0005763
 lincRNA gene Chr18:60157045-60161278 (-)
C3H/HeJ MGP_C3HHeJ_G0005711
 lincRNA gene Chr18:61919152-61923527 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005924
 lincRNA gene Chr18:64402132-64406303 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005267
 lincRNA gene Chr18:59538660-59542892 (-)
CAST/EiJ MGP_CASTEiJ_G0005652
 lincRNA gene Chr18:61787148-61791120 (-)
CBA/J MGP_CBAJ_G0005698
 lincRNA gene Chr18:66490707-66495032 (-)
DBA/2J MGP_DBA2J_G0005716
 lincRNA gene Chr18:59681681-59685838 (-)
FVB/NJ MGP_FVBNJ_G0005743
 lincRNA gene Chr18:59077042-59081710 (-)
LP/J MGP_LPJ_G0005797
 lincRNA gene Chr18:62579906-62586424 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005729
 lincRNA gene Chr18:68026447-68031826 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005922
 lincRNA gene Chr18:61877568-61883857 (-)
PWK/PhJ MGP_PWKPhJ_G0005597
 lincRNA gene Chr18:59919317-59923220 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005513
 lincRNA gene Chr18:62098169-62102104 (-)
WSB/EiJ MGP_WSBEiJ_G0005704
 lincRNA gene Chr18:61739864-61745133 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 78449 NCBI Gene Model | MGI Sequence Detail 4674 C57BL/6J ±  kb
transcript NR_037693 RefSeq | MGI Sequence Detail 2151 C57BL/6  
polypeptide Q9D218 UniProt | EBI | MGI Sequence Detail 133 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 4
Other
Accession IDs
less
MGI:1925699
References
more
  • Summaries
    All 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory