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Hsdl1 Gene Detail
Summary
  • Symbol
    Hsdl1
  • Name
    hydroxysteroid dehydrogenase like 1
  • Synonyms
    2700067E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919802
    NCBI Gene: 72552
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:119561989-119575183 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 67.95 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    49 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919802
protein coding gene Chr8:119561978-119575200 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034185
protein coding gene Chr8:122891893-122907426 (-)
A/J MGP_AJ_G0034165
protein coding gene Chr8:117835778-117848949 (-)
AKR/J MGP_AKRJ_G0034092
protein coding gene Chr8:121252197-121267403 (-)
BALB/cJ MGP_BALBcJ_G0034159
protein coding gene Chr8:118037709-118051987 (-)
C3H/HeJ MGP_C3HHeJ_G0033870
protein coding gene Chr8:121982902-121997284 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034679
protein coding gene Chr8:127008982-127023426 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031621
protein coding gene Chr8:110727956-110741054 (-)
CAST/EiJ MGP_CASTEiJ_G0033197
protein coding gene Chr8:121925554-121938799 (-)
CBA/J MGP_CBAJ_G0033843
protein coding gene Chr8:131619413-131638590 (-)
DBA/2J MGP_DBA2J_G0033999
protein coding gene Chr8:117056272-117069802 (-)
FVB/NJ MGP_FVBNJ_G0033942
protein coding gene Chr8:116084478-116098694 (-)
LP/J MGP_LPJ_G0034088
protein coding gene Chr8:123033374-123048264 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033989
protein coding gene Chr8:134066166-134086167 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034697
protein coding gene Chr8:121403992-121419721 (-)
PWK/PhJ MGP_PWKPhJ_G0032899
protein coding gene Chr8:116809469-116823213 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032739
protein coding gene Chr8:120105601-120118668 (-)
WSB/EiJ MGP_WSBEiJ_G0033313
protein coding gene Chr8:122124660-122140143 (-)



Homology
more
  • Human Ortholog
    HSDL1, hydroxysteroid dehydrogenase like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    HSDL1, hydroxysteroid dehydrogenase like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SDR12C3
  • Links
    NCBI Gene ID: 83693
    neXtProt AC: NX_Q3SXM5
    UniProt: Q3SXM5

  • Chr Location
    16q24.1; chr16:84122139-84145195 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034189 Ensembl Gene Model | MGI Sequence Detail 13195 C57BL/6J ±  kb
transcript ENSMUST00000036049 Ensembl | MGI Sequence Detail 3141 Not Applicable  
polypeptide ENSMUSP00000044371 Ensembl | MGI Sequence Detail 330 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory