About   Help   FAQ
Atxn7l2 Gene Detail
Summary
  • Symbol
    Atxn7l2
  • Name
    ataxin 7-like 2
  • Synonyms
    2610528J18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919772
    NCBI Gene: 72522
  • Gene Overview
    MyGene.info: ATXN7L2
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108202222-108210527 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919772
protein coding gene Chr3:108202222-108210934 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027770
protein coding gene Chr3:109741342-109750054 (-)
A/J MGP_AJ_G0027730
protein coding gene Chr3:106262661-106271373 (-)
AKR/J MGP_AKRJ_G0027695
protein coding gene Chr3:108849119-108857831 (-)
BALB/cJ MGP_BALBcJ_G0027742
protein coding gene Chr3:105963833-105972545 (-)
C3H/HeJ MGP_C3HHeJ_G0027472
protein coding gene Chr3:109192512-109201224 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028186
protein coding gene Chr3:113846096-113854808 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025524
protein coding gene Chr3:102414083-102422800 (-)
CAST/EiJ MGP_CASTEiJ_G0026928
protein coding gene Chr3:108577884-108586594 (-)
CBA/J MGP_CBAJ_G0027447
protein coding gene Chr3:117709488-117718200 (-)
DBA/2J MGP_DBA2J_G0027589
protein coding gene Chr3:105444708-105453420 (-)
FVB/NJ MGP_FVBNJ_G0027557
protein coding gene Chr3:103332153-103340932 (-)
LP/J MGP_LPJ_G0027696
protein coding gene Chr3:111159253-111167965 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027587
protein coding gene Chr3:123776261-123786092 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028241
protein coding gene Chr3:108447835-108456545 (-)
PWK/PhJ MGP_PWKPhJ_G0026654
protein coding gene Chr3:105194471-105203298 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026474
protein coding gene Chr3:106583756-106592463 (-)
WSB/EiJ MGP_WSBEiJ_G0027008
protein coding gene Chr3:108977148-108985880 (-)



Homology
more
  • Human Ortholog
    ATXN7L2, ataxin 7 like 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ATXN7L2, ataxin 7 like 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 127002
    neXtProt AC: NX_Q5T6C5
    UniProt: Q5T6C5

  • Chr Location
    1p13.3; chr1:109483904-109492804 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72522 NCBI Gene Model | MGI Sequence Detail 8306 C57BL/6J ±  kb
transcript NM_175183 RefSeq | MGI Sequence Detail 2638 C57BL/6  
polypeptide NP_001276474 RefSeq | MGI Sequence Detail 754 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR013243 SCA7 domain
Molecular
Reagents
less
  • All nucleic 37
    cDNA 37

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Diseases 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory