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Zc3h15 Gene Detail
Summary
  • Symbol
    Zc3h15
  • Name
    zinc finger CCCH-type containing 15
  • Synonyms
    1700006A17Rik, 1810012H02Rik, 2610312B22Rik, FM22, Ierepo4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919747
    NCBI Gene: 69082
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:83644578-83664617 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 49.33 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919747
protein coding gene Chr2:83644435-83664622 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025891
protein coding gene Chr2:84292694-84314413 (+)
A/J MGP_AJ_G0025868
protein coding gene Chr2:81062638-81082551 (+)
AKR/J MGP_AKRJ_G0025837
protein coding gene Chr2:83149392-83171758 (+)
BALB/cJ MGP_BALBcJ_G0025864
protein coding gene Chr2:81193710-81214404 (+)
C3H/HeJ MGP_C3HHeJ_G0025623
protein coding gene Chr2:83426684-83447395 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026310
protein coding gene Chr2:86868736-86888828 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023713
protein coding gene Chr2:77982918-78002438 (+)
CAST/EiJ MGP_CASTEiJ_G0025085
protein coding gene Chr2:83890264-83914670 (+)
CBA/J MGP_CBAJ_G0025604
protein coding gene Chr2:90028419-90048919 (+)
DBA/2J MGP_DBA2J_G0025735
protein coding gene Chr2:80631246-80655758 (+)
FVB/NJ MGP_FVBNJ_G0025697
protein coding gene Chr2:79866109-79886633 (+)
LP/J MGP_LPJ_G0025823
protein coding gene Chr2:84135417-84155275 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025728
protein coding gene Chr2:92256131-92278979 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026366
protein coding gene Chr2:83354511-83377278 (+)
PWK/PhJ MGP_PWKPhJ_G0024828
protein coding gene Chr2:80429027-80451313 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024633
protein coding gene Chr2:83493389-83513348 (+)
WSB/EiJ MGP_WSBEiJ_G0025154
protein coding gene Chr2:84014959-84034844 (+)



Homology
more
  • Human Ortholog
    ZC3H15, zinc finger CCCH-type containing 15
  • Vertebrate Orthologs
    5
  • Human Ortholog
    ZC3H15, zinc finger CCCH-type containing 15
    Orthology source: HGNC
  • Synonyms
    HT010, LEREPO4, MSTP012
  • Links
    NCBI Gene ID: 55854
    neXtProt AC: NX_Q8WU90
    UniProt: Q8WU90

  • Chr Location
    2q32.1; chr2:186486158-186509361 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69082 NCBI Gene Model | MGI Sequence Detail 20040 C57BL/6J ±  kb
transcript NM_026934 RefSeq | MGI Sequence Detail 1963 C57BL/6  
polypeptide Q3TIV5 UniProt | EBI | MGI Sequence Detail 426 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 152
    cDNA 151
    Primer pair 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:1916332, MGI:1916542, MGI:1932275
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 10
  • Earliest
    J:67142 Gregory RC, et al., Subtraction cloning and initial characterization of novel epo-immediate response genes. Cytokine. 2000 Jul;12(7):845-57
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory