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Hsdl2 Gene Detail
Summary
  • Symbol
    Hsdl2
  • Name
    hydroxysteroid dehydrogenase like 2
  • Synonyms
    2610207I16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919729
    NCBI Gene: 72479
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:59581563-59618689 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 32.69 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    119 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919729
protein coding gene Chr4:59581326-59618694 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028337
protein coding gene Chr4:58491484-58533009 (+)
A/J MGP_AJ_G0028298
protein coding gene Chr4:56241171-56279940 (+)
AKR/J MGP_AKRJ_G0028247
protein coding gene Chr4:57814824-57852777 (+)
BALB/cJ MGP_BALBcJ_G0028317
protein coding gene Chr4:56415747-56453778 (+)
C3H/HeJ MGP_C3HHeJ_G0028038
protein coding gene Chr4:58351626-58393771 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028758
protein coding gene Chr4:60526351-60569350 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026064
protein coding gene Chr4:52972347-53014430 (+)
CAST/EiJ MGP_CASTEiJ_G0027476
protein coding gene Chr4:58070469-58117684 (+)
CBA/J MGP_CBAJ_G0028003
protein coding gene Chr4:62587511-62626975 (+)
DBA/2J MGP_DBA2J_G0028153
protein coding gene Chr4:56141517-56178208 (+)
FVB/NJ MGP_FVBNJ_G0028120
protein coding gene Chr4:55348067-55385525 (+)
LP/J MGP_LPJ_G0028252
protein coding gene Chr4:58583931-58622785 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028144
protein coding gene Chr4:65718473-65755305 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028794
protein coding gene Chr4:58000940-58038391 (+)
PWK/PhJ MGP_PWKPhJ_G0027201
protein coding gene Chr4:56179439-56220971 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027029
protein coding gene Chr4:57327521-57366560 (+)
WSB/EiJ MGP_WSBEiJ_G0027554
protein coding gene Chr4:57989065-58029225 (+)



Homology
more
  • Human Ortholog
    HSDL2, hydroxysteroid dehydrogenase like 2
  • Human Ortholog
    HSDL2, hydroxysteroid dehydrogenase like 2
    Orthology source: HGNC
  • Synonyms
    C9orf99, SDR13C1
  • Links
    NCBI Gene ID: 84263
    neXtProt AC: NX_Q6YN16
    UniProt: Q6YN16

  • Chr Location
    9q32; chr9:112379292-112472410 (+)  GRCh38.p7

  • HCOP
    human homology predictions: HSDL2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028383 Ensembl Gene Model | MGI Sequence Detail 37127 C57BL/6J ±  kb
transcript ENSMUST00000030078 Ensembl | MGI Sequence Detail 2611 Not Applicable  
polypeptide ENSMUSP00000030078 Ensembl | MGI Sequence Detail 490 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 108
    cDNA 108

    Microarray probesets 6
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:239017 Steinmetz CC, et al., Upregulation of mu3A Drives Homeostatic Plasticity by Rerouting AMPAR into the Recycling Endosomal Pathway. Cell Rep. 2016 Sep 06;16(10):2711-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/07/2019
MGI 6.14
The Jackson Laboratory