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Tbcd Gene Detail
Summary
  • Symbol
    Tbcd
  • Name
    tubulin-specific chaperone d
  • Synonyms
    2310057L06Rik, A030005L14Rik, mKIAA0988
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919686
    NCBI Gene: 108903
  • Gene Overview
    MyGene.info: TBCD
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:121451949-121617164 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 85.41 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    635 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919686
protein coding gene Chr11:121450584-121617170 (.)
129S1/SvImJ MGP_129S1SvImJ_G0019550
protein coding gene Chr11:126000219-126169924 (+)
A/J MGP_AJ_G0019517
protein coding gene Chr11:120358546-120522114 (+)
AKR/J MGP_AKRJ_G0019487
protein coding gene Chr11:124012418-124184578 (+)
BALB/cJ MGP_BALBcJ_G0019492
protein coding gene Chr11:120738183-120904262 (+)
C3H/HeJ MGP_C3HHeJ_G0019298
protein coding gene Chr11:124327188-124514902 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019941
protein coding gene Chr11:129815303-129992653 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017566
protein coding gene Chr11:117347902-117511076 (+)
CAST/EiJ MGP_CASTEiJ_G0018852
protein coding gene Chr11:125831233-126000355 (+)
CBA/J MGP_CBAJ_G0019269
protein coding gene Chr11:134830328-135033702 (+)
DBA/2J MGP_DBA2J_G0019382
protein coding gene Chr11:119746668-119913512 (+)
FVB/NJ MGP_FVBNJ_G0019373
protein coding gene Chr11:119450908-119637983 (+)
LP/J MGP_LPJ_G0019453
protein coding gene Chr11:126274232-126447530 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019406
protein coding gene Chr11:133655497-133829688 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019980
protein coding gene Chr11:124703417-124877022 (+)
PWK/PhJ MGP_PWKPhJ_G0018619
protein coding gene Chr11:121177027-121344463 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018410
protein coding gene Chr11:124447121-124621862 (+)
WSB/EiJ MGP_WSBEiJ_G0018905
protein coding gene Chr11:124665715-124835428 (+)



Homology
more
  • Human Ortholog
    TBCD, tubulin folding cofactor D
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TBCD, tubulin folding cofactor D
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PEBAT, SSD-1, tfcD
  • Links
    NCBI Gene ID: 6904
    neXtProt AC: NX_Q9BTW9
    UniProt: Q9BTW9

  • Chr Location
    17q25.3; chr17:82752048-82943186 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 4368
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TBCD
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039230 Ensembl Gene Model | MGI Sequence Detail 165216 C57BL/6J ±  kb
transcript ENSMUST00000103013 Ensembl | MGI Sequence Detail 3906 Not Applicable  
polypeptide ENSMUSP00000099302 Ensembl | MGI Sequence Detail 1196 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR011989 Armadillo-like helical
    IPR016024 Armadillo-type fold
    IPR033162 Tubulin-folding cofactor D
    IPR022577 Tubulin-specific chaperone D, C-terminal
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
Other
Accession IDs
less
MGI:1924463
References
more
  • Summaries
    All 28
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory