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Ift70b Gene Detail
Summary
  • Symbol
    Ift70b
  • Name
    intraflagellar transport 70B
  • Synonyms
    2510042P03Rik, Ttc30b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919671
    NCBI Gene: 72421
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:75766193-75768806 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 44.79 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919671
 protein coding gene Chr2:75766193-75768929 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0025837
 protein coding gene Chr2:73330247-73332765 (-)
AKR/J MGP_AKRJ_G0025805
 protein coding gene Chr2:75308768-75313642 (-)
BALB/cJ MGP_BALBcJ_G0025832
 protein coding gene Chr2:73517636-73525510 (-)
C3H/HeJ MGP_C3HHeJ_G0025591
 protein coding gene Chr2:75521901-75526408 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026278
 protein coding gene Chr2:78585950-78587801 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023681
 protein coding gene Chr2:70749176-70751879 (-)
CAST/EiJ MGP_CASTEiJ_G0025055
 protein coding gene Chr2:75842562-75846941 (-)
CBA/J MGP_CBAJ_G0025572
 protein coding gene Chr2:81473260-81479530 (-)
DBA/2J MGP_DBA2J_G0025703
 protein coding gene Chr2:72925920-72929801 (-)
FVB/NJ MGP_FVBNJ_G0025666
 protein coding gene Chr2:72351955-72354086 (-)
LP/J MGP_LPJ_G0025791
 protein coding gene Chr2:76178764-76184788 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025696
 protein coding gene Chr2:83347075-83349811 (-)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0024796
 protein coding gene Chr2:72887567-72889852 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0025123
 protein coding gene Chr2:75897733-75900976 (-)



Homology
more
  • Human Ortholog
    IFT70B, intraflagellar transport 70B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IFT70B, intraflagellar transport 70B
  • Synonyms
    fleer, IFT70, TTC30B
  • Links
    NCBI Gene ID: 150737
    neXtProt AC: NX_Q8N4P2
    UniProt: Q8N4P2

  • Chr Location
    2q31.2; chr2:177548998-177552796 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    22
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 72421 NCBI Gene Model | MGI Sequence Detail 2614 C57BL/6J ±  kb
    transcript NM_028235 RefSeq | MGI Sequence Detail 2634 Not Specified  
    polypeptide Q9CY00 UniProt | EBI | MGI Sequence Detail 664 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR011990 Tetratricopeptide-like helical domain superfamily
      IPR019734 Tetratricopeptide repeat
      IPR039941 Tetratricopeptide repeat protein 30
    Molecular
    Reagents
    less
    • All nucleic 22
      cDNA 22

      Microarray probesets 3
    References
    more
    • Summaries
      All 33
      Gene Ontology 6
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory