About   Help   FAQ
2210016L21Rik Gene Detail
Summary
  • Symbol
    2210016L21Rik
  • Name
    RIKEN cDNA 2210016L21 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919607
    NCBI Gene: 72357
  • Gene Overview
    MyGene.info: C12orf43
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:114942163-114948540 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 55.99 cM, cytoband F
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919607
protein coding gene Chr5:114942158-114949783 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029953
protein coding gene Chr5:117750581-117762212 (+)
A/J MGP_AJ_G0029918
protein coding gene Chr5:113094052-113101681 (+)
AKR/J MGP_AKRJ_G0029856
protein coding gene Chr5:116695946-116703578 (+)
BALB/cJ MGP_BALBcJ_G0029929
protein coding gene Chr5:114489270-114496826 (+)
C3H/HeJ MGP_C3HHeJ_G0029648
protein coding gene Chr5:117219910-117227544 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030383
protein coding gene Chr5:122305761-122314778 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027610
protein coding gene Chr5:107886431-107893986 (+)
CAST/EiJ MGP_CASTEiJ_G0029057
protein coding gene Chr5:116129188-116138047 (+)
CBA/J MGP_CBAJ_G0029616
protein coding gene Chr5:126966886-126975814 (+)
DBA/2J MGP_DBA2J_G0029766
protein coding gene Chr5:113173961-113182020 (+)
FVB/NJ MGP_FVBNJ_G0029722
protein coding gene Chr5:111983097-111993438 (+)
LP/J MGP_LPJ_G0029854
protein coding gene Chr5:118328362-118335966 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029753
protein coding gene Chr5:131335581-131344619 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030424
protein coding gene Chr5:116169568-116177132 (+)
PWK/PhJ MGP_PWKPhJ_G0028770
protein coding gene Chr5:111822725-111830234 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028608
protein coding gene Chr5:113716059-113723578 (+)
WSB/EiJ MGP_WSBEiJ_G0029132
protein coding gene Chr5:116754591-116762198 (+)



Homology
more
  • Human Ortholog
    C12orf43, chromosome 12 open reading frame 43
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C12orf43, chromosome 12 open reading frame 43
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Custos
  • Links
    NCBI Gene ID: 64897
    neXtProt AC: NX_Q96C57
    UniProt: Q96C57

  • Chr Location
    12q24.31; chr12:121002422-121016502 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving 2210016L21Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72357 NCBI Gene Model | MGI Sequence Detail 6378 C57BL/6J ±  kb
transcript NM_028211 RefSeq | MGI Sequence Detail 1350 FVB/N  
polypeptide Q3UY34 UniProt | EBI | MGI Sequence Detail 256 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR026694 Protein CUSTOS
Molecular
Reagents
less
  • All nucleic 72
    cDNA 72

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Gene Ontology 4
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:209956 Liakath-Ali K, et al., Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen. Nat Commun. 2014;5:3540

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory