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Ttc4 Gene Detail
Summary
  • Symbol
    Ttc4
  • Name
    tetratricopeptide repeat domain 4
  • Synonyms
    2810002P21Rik, L62
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919604
    NCBI Gene: 72354
  • Gene Overview
    MyGene.info: TTC4
Location & Maps
more
  • Sequence Map
    Chr4:106662256-106678944 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      16689 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    TTC4, tetratricopeptide repeat domain 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TTC4, tetratricopeptide repeat domain 4
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 7268
    neXtProt AC: NX_O95801

  • Chr Location
    1p32.3; chr1:54715822-54742657 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 31249
    1 human;1 mouse;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: TTC4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    6
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Ttc4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008164 VEGA Gene Model | MGI Sequence Detail 16689 C57BL/6J ±  kb
transcript OTTMUST00000018529 VEGA | MGI Sequence Detail 2121 Not Applicable  
polypeptide OTTMUSP00000008507 VEGA | MGI Sequence Detail 386 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    110 from dbSNP Build 142
Protein
Information
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  • UniProt
    7 Sequences
  • Protein Ontology
    PR:000029839 tetratricopeptide repeat protein 4
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
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  • All nucleic 94
    cDNA 94

    Microarray probesets 4
Other
Accession IDs
less
MGI:1354750
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Phenotypes 9
  • Earliest
    J:47962 Jurecic R, et al., Identification and cloning of differentially expressed genes by long-distance differential display. Anal Biochem. 1998 Jun 1;259(2):235-44
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/26/2016
MGI 6.03
The Jackson Laboratory