About   Help   FAQ
Zc2hc1c Gene Detail
Summary
  • Symbol
    Zc2hc1c
  • Name
    zinc finger, C2HC-type containing 1C
  • Synonyms
    2810002I04Rik, Fam164c
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919600
    NCBI Gene: 72350
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:85288591-85299358 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 39.63 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919600
protein coding gene Chr12:85274388-85299361 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019958
protein coding gene Chr12:86058732-86069499 (+)
A/J MGP_AJ_G0019915
protein coding gene Chr12:82791564-82802331 (+)
AKR/J MGP_AKRJ_G0019891
protein coding gene Chr12:85037661-85048429 (+)
BALB/cJ MGP_BALBcJ_G0019895
protein coding gene Chr12:83135400-83146167 (+)
C3H/HeJ MGP_C3HHeJ_G0019701
protein coding gene Chr12:85508396-85519163 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020346
protein coding gene Chr12:88545267-88556034 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017964
protein coding gene Chr12:79677053-79689277 (+)
CAST/EiJ MGP_CASTEiJ_G0019250
protein coding gene Chr12:80479616-80490526 (+)
CBA/J MGP_CBAJ_G0019672
protein coding gene Chr12:91920808-91931575 (+)
DBA/2J MGP_DBA2J_G0019787
protein coding gene Chr12:82307983-82318750 (+)
FVB/NJ MGP_FVBNJ_G0019773
protein coding gene Chr12:81270988-81281755 (+)
LP/J MGP_LPJ_G0019859
protein coding gene Chr12:85934106-85944873 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019812
protein coding gene Chr12:94799095-94809862 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020380
protein coding gene Chr12:84640532-84651299 (+)
PWK/PhJ MGP_PWKPhJ_G0019014
protein coding gene Chr12:76810456-76821153 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018809
protein coding gene Chr12:79118751-79130055 (+)
WSB/EiJ MGP_WSBEiJ_G0019302
protein coding gene Chr12:85366918-85377696 (+)



Homology
more
  • Human Ortholog
    ZC2HC1C, zinc finger C2HC-type containing 1C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZC2HC1C, zinc finger C2HC-type containing 1C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf140, FAM164C
  • Links
    NCBI Gene ID: 79696
    neXtProt AC: NX_Q53FD0
    UniProt: Q53FD0

  • Chr Location
    14q24.3; chr14:75069577-75079987 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Zc2hc1c
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045064 Ensembl Gene Model | MGI Sequence Detail 10768 C57BL/6J ±  kb
transcript ENSMUST00000059341 Ensembl | MGI Sequence Detail 4482 Not Applicable  
polypeptide ENSMUSP00000051664 Ensembl | MGI Sequence Detail 527 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 7
Other
Accession IDs
less
MGI:2144980
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/13/2019
MGI 6.13
The Jackson Laboratory