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Lsm12 Gene Detail
Summary
  • Symbol
    Lsm12
  • Name
    LSM12 homolog
  • Synonyms
    1110032E16Rik, 2600001B17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919592
    NCBI Gene: 268490
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:102162497-102185296 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 65.60 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919592
protein coding gene Chr11:102162497-102186269 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019224
protein coding gene Chr11:105115056-105137986 (-)
A/J MGP_AJ_G0019192
protein coding gene Chr11:100675830-100699132 (-)
AKR/J MGP_AKRJ_G0019161
protein coding gene Chr11:103793709-103818778 (-)
BALB/cJ MGP_BALBcJ_G0019166
protein coding gene Chr11:101159976-101187276 (-)
C3H/HeJ MGP_C3HHeJ_G0018975
protein coding gene Chr11:103996539-104020328 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019615
protein coding gene Chr11:108387232-108411495 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017241
protein coding gene Chr11:98105539-98128977 (-)
CAST/EiJ MGP_CASTEiJ_G0018529
protein coding gene Chr11:104968943-104994799 (-)
CBA/J MGP_CBAJ_G0018944
protein coding gene Chr11:112860214-112885835 (-)
DBA/2J MGP_DBA2J_G0019056
protein coding gene Chr11:100199699-100223377 (-)
FVB/NJ MGP_FVBNJ_G0019046
protein coding gene Chr11:99728589-99751576 (-)
LP/J MGP_LPJ_G0019125
protein coding gene Chr11:105635989-105659749 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019077
protein coding gene Chr11:112382699-112409143 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019653
protein coding gene Chr11:104154513-104178509 (-)
PWK/PhJ MGP_PWKPhJ_G0018292
protein coding gene Chr11:101261574-101285404 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018084
protein coding gene Chr11:103911245-103935212 (-)
WSB/EiJ MGP_WSBEiJ_G0018578
protein coding gene Chr11:104147500-104171232 (-)



Homology
more
  • Human Ortholog
    LSM12, LSM12 homolog
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LSM12, LSM12 homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PNAS-135
  • Links
    NCBI Gene ID: 124801
    neXtProt AC: NX_Q3MHD2
    UniProt: Q3MHD2

  • Chr Location
    17q21.31; chr17:44034635-44067619 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020922 Ensembl Gene Model | MGI Sequence Detail 22800 C57BL/6J ±  kb
transcript ENSMUST00000021297 Ensembl | MGI Sequence Detail 2256 Not Applicable  
polypeptide ENSMUSP00000021297 Ensembl | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 6
Other
Accession IDs
less
MGI:1915991
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2019
MGI 6.13
The Jackson Laboratory