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Lsm12 Gene Detail
Summary
  • Symbol
    Lsm12
  • Name
    LSM12 homolog
  • Synonyms
    1110032E16Rik, 2600001B17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919592
    NCBI Gene: 268490
Location & Maps
more
  • Sequence Map
    Chr11:102162497-102185296 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      22800 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 65.60 cM, cytoband D
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    LSM12, LSM12 homolog
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LSM12, LSM12 homolog
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PNAS-135
  • Links
    NCBI Gene ID: 124801
    neXtProt AC: NX_Q3MHD2

  • Chr Location
    17q21.31; chr17:44034635-44067619 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    10
  • Gene trapped
    7
  • Targeted
    3
  • Genomic Mutations
    1 involving Lsm12
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002494 VEGA Gene Model | MGI Sequence Detail 22800 C57BL/6J ±  kb
transcript OTTMUST00000004879 VEGA | MGI Sequence Detail 2256 Not Applicable  
polypeptide OTTMUSP00000002345 VEGA | MGI Sequence Detail 195 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    145 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000009957 protein LSM12
  • InterPro Domains
    IPR019181 Anticodon-binding domain
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 6
Other
Accession IDs
less
MGI:1915991
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory