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Shisal1 Gene Detail
Summary
  • Symbol
    Shisal1
  • Name
    shisa like 1
  • Synonyms
    1810041L15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919551
    NCBI Gene: 72301
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:84379203-84447097 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 39.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    549 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919551
 protein coding gene Chr15:84379203-84482839 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022178
 protein coding gene Chr15:85169616-85240866 (-)
A/J MGP_AJ_G0022137
 protein coding gene Chr15:82021027-82090920 (-)
AKR/J MGP_AKRJ_G0022112
 protein coding gene Chr15:84411469-84482084 (-)
BALB/cJ MGP_BALBcJ_G0022143
 protein coding gene Chr15:82155378-82225903 (-)
C3H/HeJ MGP_C3HHeJ_G0021913
 protein coding gene Chr15:84369809-84441717 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022588
 protein coding gene Chr15:88408811-88482114 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020113
 protein coding gene Chr15:78376865-78445930 (-)
CAST/EiJ MGP_CASTEiJ_G0021435
 protein coding gene Chr15:85173451-85246609 (-)
CBA/J MGP_CBAJ_G0021880
 protein coding gene Chr15:91278431-91354157 (-)
DBA/2J MGP_DBA2J_G0022007
 protein coding gene Chr15:81498238-81565686 (-)
FVB/NJ MGP_FVBNJ_G0021986
 protein coding gene Chr15:80548857-80617115 (-)
LP/J MGP_LPJ_G0022078
 protein coding gene Chr15:85321088-85393239 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022006
 protein coding gene Chr15:96089937-96161384 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022603
 protein coding gene Chr15:84428939-84500546 (-)
PWK/PhJ MGP_PWKPhJ_G0021176
 protein coding gene Chr15:81499161-81571655 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021010
 protein coding gene Chr15:84132052-84212263 (-)
WSB/EiJ MGP_WSBEiJ_G0021484
 protein coding gene Chr15:84926928-85001380 (-)



Homology
more
  • Human Ortholog
    SHISAL1, shisa like 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SHISAL1, shisa like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KIAA1644
  • Links
    NCBI Gene ID: 85352
    neXtProt AC: NX_Q3SXP7
    UniProt: Q3SXP7

  • Chr Location
    22q13.31; chr22:44243665-44331693 (-)  GRCh38.p7
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Shisal1
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    12 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    129
  • Tissues
    27
  • cDNA Data
    62
  • Literature Summary
    3
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000062760 Ensembl Gene Model | MGI Sequence Detail 67895 C57BL/6J ±  kb
transcript ENSMUST00000189248 Ensembl | MGI Sequence Detail 5296 Not Applicable  
polypeptide ENSMUSP00000141117 Ensembl | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR026910 Shisa family
Molecular
Reagents
less
  • All nucleic 65
    cDNA 63
    Primer pair 1
    Other 1

    Microarray probesets 4
References
more
  • Summaries
    All 42
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
10/08/2019
MGI 6.14 		The Jackson Laboratory