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Tram1 Gene Detail
Summary
  • Symbol
    Tram1
  • Name
    translocating chain-associating membrane protein 1
  • Synonyms
    1810049E02Rik, MGC:1174, TRAMP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919515
    NCBI Gene: 72265
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:13564698-13589910 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 4.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919515
protein coding gene Chr1:13564693-13589910 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015842
protein coding gene Chr1:10925825-10958289 (-)
A/J MGP_AJ_G0015824
protein coding gene Chr1:10882561-10908436 (-)
AKR/J MGP_AKRJ_G0015783
protein coding gene Chr1:10816867-10842103 (-)
BALB/cJ MGP_BALBcJ_G0015780
protein coding gene Chr1:10590679-10615914 (-)
C3H/HeJ MGP_C3HHeJ_G0015614
protein coding gene Chr1:10788033-10817253 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016234
protein coding gene Chr1:11459828-11486465 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013955
protein coding gene Chr1:9506121-9534080 (-)
CAST/EiJ MGP_CASTEiJ_G0015194
protein coding gene Chr1:10990269-11017426 (-)
CBA/J MGP_CBAJ_G0015587
protein coding gene Chr1:11695676-11723942 (-)
DBA/2J MGP_DBA2J_G0015686
protein coding gene Chr1:10501740-10527111 (-)
FVB/NJ MGP_FVBNJ_G0015691
protein coding gene Chr1:10311792-10337535 (-)
LP/J MGP_LPJ_G0015758
protein coding gene Chr1:11119670-11152628 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015710
protein coding gene Chr1:12423237-12448617 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016281
protein coding gene Chr1:10727578-10757910 (-)
PWK/PhJ MGP_PWKPhJ_G0014978
protein coding gene Chr1:10310884-10336969 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014759
protein coding gene Chr1:10953553-10983435 (-)
WSB/EiJ MGP_WSBEiJ_G0015258
protein coding gene Chr1:10738015-10769262 (-)



Homology
more
  • Human Ortholog
    TRAM1, translocation associated membrane protein 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRAM1, translocation associated membrane protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PNAS8, TRAM, TRAMP
  • Links
    NCBI Gene ID: 23471
    neXtProt AC: NX_Q15629
    UniProt: Q15629

  • Chr Location
    8q13.3; chr8:70573218-70608459 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025935 Ensembl Gene Model | MGI Sequence Detail 25213 C57BL/6J ±  kb
transcript ENSMUST00000027068 Ensembl | MGI Sequence Detail 2938 Not Applicable  
polypeptide ENSMUSP00000027068 Ensembl | MGI Sequence Detail 374 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 226
    cDNA 226

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory