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1700001J11Rik Pseudogene Detail
Summary
  • Symbol
    1700001J11Rik
  • Name
    RIKEN cDNA 1700001J11 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:1919474
    NCBI Gene: 72224
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:40050558-40053025 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 21.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919474
pseudogene Chr9:40050365-40053028 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0039753
pseudogene Chr9:37252215-37254878 (+)
AKR/J MGP_AKRJ_G0039677
pseudogene Chr9:37974056-37977092 (+)
BALB/cJ MGP_BALBcJ_G0039721
pseudogene Chr9:37024455-37027134 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040284
pseudogene Chr9:39475140-39480109 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036910
pseudogene Chr9:36928792-36929550 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0039549
pseudogene Chr9:37221657-37224321 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72224 NCBI Gene Model | MGI Sequence Detail 2468 C57BL/6J ±  kb
transcript NR_033613 RefSeq | MGI Sequence Detail 2468 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory