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1700016L21Rik Gene Detail
Summary
  • Symbol
    1700016L21Rik
  • Name
    RIKEN cDNA 1700016L21 gene
  • Synonyms
    DCKO, Jr3
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919458
    NCBI Gene: 72208
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:80445932-80475660 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    249 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919458
lncRNA gene Chr1:80445932-80479867 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004889
lincRNA gene Chr1:81266069-81302132 (+)
A/J MGP_AJ_G0004871
lincRNA gene Chr1:78401365-78436907 (+)
AKR/J MGP_AKRJ_G0004849
lincRNA gene Chr1:80547371-80581348 (+)
BALB/cJ MGP_BALBcJ_G0004852
lincRNA gene Chr1:78480592-78515346 (+)
C3H/HeJ MGP_C3HHeJ_G0004801
lincRNA gene Chr1:80894501-80928319 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005003
lincRNA gene Chr1:84425969-84463190 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004428
lincRNA gene Chr1:73709069-73745621 (+)
CAST/EiJ MGP_CASTEiJ_G0004753
lincRNA gene Chr1:80269708-80307827 (+)
CBA/J MGP_CBAJ_G0004794
lincRNA gene Chr1:87124027-87161117 (+)
DBA/2J MGP_DBA2J_G0004812
lincRNA gene Chr1:77701306-77736279 (+)
FVB/NJ MGP_FVBNJ_G0004831
lincRNA gene Chr1:76838235-76873291 (+)
LP/J MGP_LPJ_G0004890
lincRNA gene Chr1:82416905-82454098 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004816
lincRNA gene Chr1:90409569-90445262 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005007
lincRNA gene Chr1:80680627-80729533 (+)
PWK/PhJ MGP_PWKPhJ_G0004705
lincRNA gene Chr1:77127213-77162103 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004631
lincRNA gene Chr1:79932752-79972794 (+)
WSB/EiJ MGP_WSBEiJ_G0004798
lincRNA gene Chr1:80436639-80473757 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    42 phenotypes from 1 allele in 7 genetic backgrounds
    7 phenotypes from multigenic genotypes
    304 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Transgenic
    1
  • Genomic Mutations
    2 involving 1700016L21Rik
  • Find Mice (IMSR)
Expression
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  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72208 NCBI Gene Model | MGI Sequence Detail 29729 C57BL/6J ±  kb
transcript NR_040460 RefSeq | MGI Sequence Detail 394 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 2
    Primer pair 1
Other
Accession IDs
less
MGI:3057164
References
more
  • Summaries
    All 312
    Phenotypes 304
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:281954 McPherson SW, et al., The retinal environment induces microglia-like properties in recruited myeloid cells. J Neuroinflammation. 2019 Jul 20;16(1):151

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory