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Cenpn Gene Detail
Summary
  • Symbol
    Cenpn
  • Name
    centromere protein N
  • Synonyms
    2610510J17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919405
    NCBI Gene: 72155
  • Gene Overview
    MyGene.info: CENPN
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:116921730-116941507 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 63.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    100 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919405
protein coding gene Chr8:116921667-116941507 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034166
protein coding gene Chr8:120041574-120061337 (+)
A/J MGP_AJ_G0034146
protein coding gene Chr8:115160908-115180670 (+)
AKR/J MGP_AKRJ_G0034073
protein coding gene Chr8:118508150-118527913 (+)
BALB/cJ MGP_BALBcJ_G0034140
protein coding gene Chr8:115357691-115377453 (+)
C3H/HeJ MGP_C3HHeJ_G0033851
protein coding gene Chr8:119232083-119251424 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034660
protein coding gene Chr8:124119109-124138333 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031602
protein coding gene Chr8:108092528-108113359 (+)
CAST/EiJ MGP_CASTEiJ_G0033178
protein coding gene Chr8:119047870-119067758 (+)
CBA/J MGP_CBAJ_G0033824
protein coding gene Chr8:128600044-128619261 (+)
DBA/2J MGP_DBA2J_G0033980
protein coding gene Chr8:114389006-114408768 (+)
FVB/NJ MGP_FVBNJ_G0033923
protein coding gene Chr8:113364172-113384112 (+)
LP/J MGP_LPJ_G0034069
protein coding gene Chr8:120173911-120193125 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033970
protein coding gene Chr8:131194469-131214449 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034678
protein coding gene Chr8:118602192-118621955 (+)
PWK/PhJ MGP_PWKPhJ_G0032880
protein coding gene Chr8:114087900-114108093 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032720
protein coding gene Chr8:117288781-117309188 (+)
WSB/EiJ MGP_WSBEiJ_G0033294
protein coding gene Chr8:119314838-119334601 (+)



Homology
more
  • Human Ortholog
    CENPN, centromere protein N
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CENPN, centromere protein N
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BM039, C16orf60, CENP-N, ICEN32
  • Links
    NCBI Gene ID: 55839
    neXtProt AC: NX_Q96H22
    UniProt: Q96H22

  • Chr Location
    16q23.2; chr16:81006498-81033107 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031756 Ensembl Gene Model | MGI Sequence Detail 19778 C57BL/6J ±  kb
transcript ENSMUST00000034205 Ensembl | MGI Sequence Detail 1768 Not Applicable  
polypeptide ENSMUSP00000034205 Ensembl | MGI Sequence Detail 337 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142531, MGI:2142799
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory