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Ccdc71l Gene Detail
Summary
  • Symbol
    Ccdc71l
  • Name
    coiled-coil domain containing 71 like
  • Synonyms
    2010109K11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919373
    NCBI Gene: 72123
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:32378789-32382943 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 13.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919373
protein coding gene Chr12:32378704-32382943 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019670
protein coding gene Chr12:30406833-30411077 (+)
A/J MGP_AJ_G0019637
protein coding gene Chr12:29509719-29513954 (+)
AKR/J MGP_AKRJ_G0019608
protein coding gene Chr12:30445541-30449776 (+)
BALB/cJ MGP_BALBcJ_G0019614
protein coding gene Chr12:29727938-29732173 (+)
C3H/HeJ MGP_C3HHeJ_G0019418
protein coding gene Chr12:30318463-30322698 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020061
protein coding gene Chr12:31323615-31331442 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017686
protein coding gene Chr12:28799964-28804188 (+)
CAST/EiJ MGP_CASTEiJ_G0018973
protein coding gene Chr12:25344596-25348830 (+)
CBA/J MGP_CBAJ_G0019390
protein coding gene Chr12:32334190-32338425 (+)
DBA/2J MGP_DBA2J_G0019503
protein coding gene Chr12:29324677-29328916 (+)
FVB/NJ MGP_FVBNJ_G0019494
protein coding gene Chr12:29109585-29114864 (+)
LP/J MGP_LPJ_G0019573
protein coding gene Chr12:30472798-30477037 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019529
protein coding gene Chr12:31966967-31974643 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020101
protein coding gene Chr12:29968750-29972989 (+)
PWK/PhJ MGP_PWKPhJ_G0018740
protein coding gene Chr12:24096464-24100931 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018528
protein coding gene Chr12:24576569-24580808 (+)
WSB/EiJ MGP_WSBEiJ_G0019023
protein coding gene Chr12:30213629-30217864 (+)



Homology
more
  • Human Ortholog
    CCDC71L, coiled-coil domain containing 71 like
  • Vertebrate Orthologs
    5
  • Human Ortholog
    CCDC71L, coiled-coil domain containing 71 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf74
  • Links
    NCBI Gene ID: 168455
    neXtProt AC: NX_Q8N9Z2
    UniProt: Q8N9Z2

  • Chr Location
    7q22.3; chr7:106656765-106661188 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72123 NCBI Gene Model | MGI Sequence Detail 4155 C57BL/6J ±  kb
transcript NM_001162903 RefSeq | MGI Sequence Detail 4155 C57BL/6  
polypeptide NP_001156375 RefSeq | MGI Sequence Detail 218 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR026695 Coiled-coil domain-containing protein 71/71L
Molecular
Reagents
less
  • All nucleic 45
    cDNA 45

    Microarray probesets 4
Other
Accession IDs
less
MGI:2144990
References
more
  • Summaries
    All 19
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory