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Zbed3 Gene Detail
Summary
  • Symbol
    Zbed3
  • Name
    zinc finger, BED type containing 3
  • Synonyms
    0610037K01Rik, 2610005H11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919364
    NCBI Gene: 72114
Location & Maps
more
  • Sequence Map
    Chr13:95325237-95337841 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      12605 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    ZBED3, zinc finger, BED-type containing 3
  • Vertebrate Orthologs
    5
  • Human Ortholog
    ZBED3, zinc finger, BED-type containing 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 84327
    neXtProt AC: NX_Q96IU2

  • Chr Location
    5q13.3; chr5:77076707-77087205 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    12
  • Gene trapped
    10
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041995 Ensembl Gene Model | MGI Sequence Detail 12605 C57BL/6J ±  kb
transcript ENSMUST00000045909 Ensembl | MGI Sequence Detail 1894 Not Applicable  
polypeptide ENSMUSP00000044774 Ensembl | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    117 from dbSNP Build 137
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000029882 zinc finger BED domain-containing protein 3
  • InterPro Domains
    IPR003656 Zinc finger, BED-type
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915634, MGI:2145348, MGI:2145367
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/02/2016
MGI 6.02
The Jackson Laboratory