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Zbed3
Gene Detail
 Symbol
Name
ID
Zbed3
zinc finger, BED domain containing 3
MGI:1919364
Synonyms 0610037K01Rik, 2610005H11Rik
Feature Type protein coding gene
Genetic Map
Chromosome 13
49.38 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:95325237-95337841 bp, + strand
From NCBI annotation of GRCm38

  12605 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12442  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle

Gene Tree: Zbed3

Human
homologs
Human Homolog ZBED3, zinc finger, BED-type containing 3
NCBI Gene ID 84327
neXtProt AC  NX_Q96IU2
Human Chr (Location)  5q13.3; chr5:77076707-77087205 (-)  GRCh38
Alleles
and
phenotypes
All alleles(12) : Targeted(2) Gene trapped(10)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process negative regulation of protein phosphorylation, positive regulation of canonical Wnt signaling pathway, ...
Component cytoplasm, cytosol, ...
Function DNA binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(14) cDNA(14)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000041995 (Evidence)
Entrez Gene72114 (Evidence)
DFCITC1573268, TC1712378, TC1713798
DoTSDT.101391185, DT.110962501, DT.528581, DT.91303034, DT.97373590, DT.97373595, DT.97373603
NIA Mouse Gene IndexU015135
Consensus CDS ProjectCCDS26696.1
International Mouse Knockout Project StatusZbed3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 72114 NCBI Gene Model | MGI Sequence Detail 12605 C57BL/6J ±  kb
transcript NM_028106 RefSeq | MGI Sequence Detail 1894 C57BL/6 
polypeptide Q9D0L1 UniProt | EBI | MGI Sequence Detail 228 Not Applicable 

For the selected sequences
All sequences(39) RefSeq(6) UniProt(3)
Polymorphisms SNPs within 2kb(117 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003656 Zinc finger, BED-type predicted
Protein Ontology PR:000029882 zinc finger BED domain-containing protein 3
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)
Other
accession IDs
MGI:1915634, MGI:2145348, MGI:2145367

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory